Protein–RNA interactions for Protein: Q96MV1

TMEM56, Transmembrane protein 56, humanhuman

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56Q96MV1 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.42■□□□□ 0.86
TMEM56Q96MV1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM56Q96MV1 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM56Q96MV1 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.42■□□□□ 0.86
TMEM56Q96MV1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM56Q96MV1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.42■□□□□ 0.86
TMEM56Q96MV1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM56Q96MV1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM56Q96MV1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.41■□□□□ 0.86
TMEM56Q96MV1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM56Q96MV1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.41■□□□□ 0.86
TMEM56Q96MV1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.41■□□□□ 0.86
TMEM56Q96MV1 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM56Q96MV1 WHAMMP2-203ENST00000563942 1603 ntBASIC20.41■□□□□ 0.86
TMEM56Q96MV1 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TMEM56Q96MV1 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM56Q96MV1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM56Q96MV1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.4■□□□□ 0.86
TMEM56Q96MV1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
TMEM56Q96MV1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMEM56Q96MV1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TMEM56Q96MV1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
TMEM56Q96MV1 AC005559.1-201ENST00000589661 871 ntBASIC20.39■□□□□ 0.85
TMEM56Q96MV1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM56Q96MV1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM56Q96MV1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
TMEM56Q96MV1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM56Q96MV1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.38■□□□□ 0.85
TMEM56Q96MV1 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM56Q96MV1 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.38■□□□□ 0.85
TMEM56Q96MV1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TMEM56Q96MV1 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM56Q96MV1 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.38■□□□□ 0.85
TMEM56Q96MV1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.37■□□□□ 0.85
TMEM56Q96MV1 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM56Q96MV1 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.36■□□□□ 0.85
TMEM56Q96MV1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM56Q96MV1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM56Q96MV1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TMEM56Q96MV1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM56Q96MV1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM56Q96MV1 AP004609.3-201ENST00000610705 1884 ntBASIC20.35■□□□□ 0.85
TMEM56Q96MV1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM56Q96MV1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM56Q96MV1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.35■□□□□ 0.85
TMEM56Q96MV1 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM56Q96MV1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
TMEM56Q96MV1 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.35■□□□□ 0.85
TMEM56Q96MV1 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM56Q96MV1 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TMEM56Q96MV1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
TMEM56Q96MV1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMEM56Q96MV1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.34■□□□□ 0.85
TMEM56Q96MV1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
TMEM56Q96MV1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.33■□□□□ 0.85
TMEM56Q96MV1 AC108673.1-201ENST00000510422 1159 ntBASIC20.33■□□□□ 0.85
TMEM56Q96MV1 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.33■□□□□ 0.85
TMEM56Q96MV1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.33■□□□□ 0.85
TMEM56Q96MV1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.33■□□□□ 0.84
TMEM56Q96MV1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.33■□□□□ 0.84
TMEM56Q96MV1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
TMEM56Q96MV1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM56Q96MV1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM56Q96MV1 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM56Q96MV1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM56Q96MV1 SUZ12P1-203ENST00000578195 985 ntBASIC20.32■□□□□ 0.84
TMEM56Q96MV1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM56Q96MV1 LINC00273-201ENST00000539813 1452 ntBASIC20.31■□□□□ 0.84
TMEM56Q96MV1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM56Q96MV1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM56Q96MV1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM56Q96MV1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM56Q96MV1 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM56Q96MV1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TMEM56Q96MV1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM56Q96MV1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM56Q96MV1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.31■□□□□ 0.84
TMEM56Q96MV1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.31■□□□□ 0.84
TMEM56Q96MV1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.3■□□□□ 0.84
TMEM56Q96MV1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM56Q96MV1 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM56Q96MV1 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.3■□□□□ 0.84
TMEM56Q96MV1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM56Q96MV1 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM56Q96MV1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM56Q96MV1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TMEM56Q96MV1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM56Q96MV1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM56Q96MV1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.29■□□□□ 0.84
TMEM56Q96MV1 AC093323.1-202ENST00000635031 2045 ntBASIC20.29■□□□□ 0.84
TMEM56Q96MV1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM56Q96MV1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM56Q96MV1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM56Q96MV1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM56Q96MV1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM56Q96MV1 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.28■□□□□ 0.84
TMEM56Q96MV1 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM56Q96MV1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM56Q96MV1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM56Q96MV1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms