Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC00479Q96M42 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LINC00479Q96M42 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LINC00479Q96M42 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC00479Q96M42 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC00479Q96M42 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
LINC00479Q96M42 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
LINC00479Q96M42 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LINC00479Q96M42 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
LINC00479Q96M42 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
LINC00479Q96M42 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.94■□□□□ 0.62
LINC00479Q96M42 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC00479Q96M42 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
LINC00479Q96M42 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC00479Q96M42 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LINC00479Q96M42 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC18.94■□□□□ 0.62
LINC00479Q96M42 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC00479Q96M42 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.94■□□□□ 0.62
LINC00479Q96M42 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC00479Q96M42 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC00479Q96M42 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC18.92■□□□□ 0.62
LINC00479Q96M42 AL391121.1-201ENST00000607967 1349 ntBASIC18.92■□□□□ 0.62
LINC00479Q96M42 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC00479Q96M42 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC00479Q96M42 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18.91■□□□□ 0.62
LINC00479Q96M42 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC00479Q96M42 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC00479Q96M42 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC00479Q96M42 AC135983.2-203ENST00000454486 1613 ntBASIC18.91■□□□□ 0.62
LINC00479Q96M42 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC00479Q96M42 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.9■□□□□ 0.62
LINC00479Q96M42 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LINC00479Q96M42 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LINC00479Q96M42 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LINC00479Q96M42 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LINC00479Q96M42 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LINC00479Q96M42 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.9■□□□□ 0.62
LINC00479Q96M42 AP004609.3-201ENST00000610705 1884 ntBASIC18.9■□□□□ 0.62
LINC00479Q96M42 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
LINC00479Q96M42 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
LINC00479Q96M42 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.89■□□□□ 0.62
LINC00479Q96M42 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LINC00479Q96M42 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LINC00479Q96M42 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.89■□□□□ 0.61
LINC00479Q96M42 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LINC00479Q96M42 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LINC00479Q96M42 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
LINC00479Q96M42 WHAMMP2-203ENST00000563942 1603 ntBASIC18.88■□□□□ 0.61
LINC00479Q96M42 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LINC00479Q96M42 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.88■□□□□ 0.61
LINC00479Q96M42 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.88■□□□□ 0.61
LINC00479Q96M42 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
LINC00479Q96M42 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC00479Q96M42 CAHM-201ENST00000604200 896 ntBASIC18.87■□□□□ 0.61
LINC00479Q96M42 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINC00479Q96M42 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
LINC00479Q96M42 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00479Q96M42 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00479Q96M42 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00479Q96M42 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
LINC00479Q96M42 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00479Q96M42 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
LINC00479Q96M42 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00479Q96M42 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00479Q96M42 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00479Q96M42 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.85■□□□□ 0.61
LINC00479Q96M42 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LINC00479Q96M42 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00479Q96M42 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC18.84■□□□□ 0.61
LINC00479Q96M42 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LINC00479Q96M42 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC00479Q96M42 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC00479Q96M42 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC00479Q96M42 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LINC00479Q96M42 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC00479Q96M42 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LINC00479Q96M42 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LINC00479Q96M42 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC00479Q96M42 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
LINC00479Q96M42 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LINC00479Q96M42 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.83■□□□□ 0.6
LINC00479Q96M42 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LINC00479Q96M42 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00479Q96M42 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00479Q96M42 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00479Q96M42 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00479Q96M42 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00479Q96M42 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00479Q96M42 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.82■□□□□ 0.6
LINC00479Q96M42 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00479Q96M42 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00479Q96M42 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00479Q96M42 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
LINC00479Q96M42 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
LINC00479Q96M42 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC00479Q96M42 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC00479Q96M42 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00479Q96M42 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.79■□□□□ 0.6
LINC00479Q96M42 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC18.79■□□□□ 0.6
LINC00479Q96M42 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms