Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SNIP1Q8TAD8 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.75■■□□□ 1.39
SNIP1Q8TAD8 GUSBP5-201ENST00000418136 578 ntBASIC23.75■■□□□ 1.39
SNIP1Q8TAD8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.75■■□□□ 1.39
SNIP1Q8TAD8 THA1P-201ENST00000590384 1145 ntBASIC23.75■■□□□ 1.39
SNIP1Q8TAD8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SNIP1Q8TAD8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SNIP1Q8TAD8 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SNIP1Q8TAD8 YBX1P4-201ENST00000392794 808 ntBASIC23.74■■□□□ 1.39
SNIP1Q8TAD8 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SNIP1Q8TAD8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
SNIP1Q8TAD8 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SNIP1Q8TAD8 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SNIP1Q8TAD8 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC23.73■■□□□ 1.39
SNIP1Q8TAD8 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SNIP1Q8TAD8 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SNIP1Q8TAD8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.73■■□□□ 1.39
SNIP1Q8TAD8 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SNIP1Q8TAD8 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
SNIP1Q8TAD8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.72■■□□□ 1.39
SNIP1Q8TAD8 AC025884.2-201ENST00000553429 711 ntBASIC23.72■■□□□ 1.39
SNIP1Q8TAD8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.72■■□□□ 1.39
SNIP1Q8TAD8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
SNIP1Q8TAD8 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SNIP1Q8TAD8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SNIP1Q8TAD8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SNIP1Q8TAD8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
SNIP1Q8TAD8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.7■■□□□ 1.39
SNIP1Q8TAD8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SNIP1Q8TAD8 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.7■■□□□ 1.38
SNIP1Q8TAD8 AC139795.1-202ENST00000500444 432 ntBASIC23.7■■□□□ 1.38
SNIP1Q8TAD8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SNIP1Q8TAD8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.69■■□□□ 1.38
SNIP1Q8TAD8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.69■■□□□ 1.38
SNIP1Q8TAD8 AC103834.1-201ENST00000520383 144 ntBASIC23.69■■□□□ 1.38
SNIP1Q8TAD8 RAP2CP1-202ENST00000605179 643 ntBASIC23.69■■□□□ 1.38
SNIP1Q8TAD8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SNIP1Q8TAD8 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
SNIP1Q8TAD8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.68■■□□□ 1.38
SNIP1Q8TAD8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SNIP1Q8TAD8 SPCS2P3-201ENST00000500401 656 ntBASIC23.68■■□□□ 1.38
SNIP1Q8TAD8 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SNIP1Q8TAD8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.68■■□□□ 1.38
SNIP1Q8TAD8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SNIP1Q8TAD8 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.67■■□□□ 1.38
SNIP1Q8TAD8 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
SNIP1Q8TAD8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.67■■□□□ 1.38
SNIP1Q8TAD8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
SNIP1Q8TAD8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SNIP1Q8TAD8 AL359258.2-201ENST00000564063 1566 ntBASIC23.66■■□□□ 1.38
SNIP1Q8TAD8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
SNIP1Q8TAD8 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SNIP1Q8TAD8 AC093536.1-201ENST00000569153 554 ntBASIC23.66■■□□□ 1.38
SNIP1Q8TAD8 MIR6765-201ENST00000614092 87 ntBASIC23.66■■□□□ 1.38
SNIP1Q8TAD8 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SNIP1Q8TAD8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SNIP1Q8TAD8 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.65■■□□□ 1.38
SNIP1Q8TAD8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SNIP1Q8TAD8 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.65■■□□□ 1.38
SNIP1Q8TAD8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.65■■□□□ 1.38
SNIP1Q8TAD8 AL135925.1-201ENST00000605920 1701 ntBASIC23.64■■□□□ 1.38
SNIP1Q8TAD8 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
SNIP1Q8TAD8 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SNIP1Q8TAD8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SNIP1Q8TAD8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
SNIP1Q8TAD8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SNIP1Q8TAD8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.64■■□□□ 1.37
SNIP1Q8TAD8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.64■■□□□ 1.37
SNIP1Q8TAD8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
SNIP1Q8TAD8 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.37
SNIP1Q8TAD8 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SNIP1Q8TAD8 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC23.63■■□□□ 1.37
SNIP1Q8TAD8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
SNIP1Q8TAD8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.63■■□□□ 1.37
SNIP1Q8TAD8 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
SNIP1Q8TAD8 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
SNIP1Q8TAD8 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.63■■□□□ 1.37
SNIP1Q8TAD8 MIR4508-201ENST00000584178 70 ntBASIC23.63■■□□□ 1.37
SNIP1Q8TAD8 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SNIP1Q8TAD8 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SNIP1Q8TAD8 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SNIP1Q8TAD8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SNIP1Q8TAD8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SNIP1Q8TAD8 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SNIP1Q8TAD8 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.61■■□□□ 1.37
SNIP1Q8TAD8 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SNIP1Q8TAD8 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SNIP1Q8TAD8 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
SNIP1Q8TAD8 PVT1_1.1-201ENST00000615125 194 ntBASIC23.6■■□□□ 1.37
SNIP1Q8TAD8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.6■■□□□ 1.37
SNIP1Q8TAD8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.6■■□□□ 1.37
SNIP1Q8TAD8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SNIP1Q8TAD8 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
SNIP1Q8TAD8 AL356441.2-201ENST00000443009 864 ntBASIC23.59■■□□□ 1.37
SNIP1Q8TAD8 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
SNIP1Q8TAD8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SNIP1Q8TAD8 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.58■■□□□ 1.37
SNIP1Q8TAD8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SNIP1Q8TAD8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
SNIP1Q8TAD8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms