Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PHC3Q8NDX5 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PHC3Q8NDX5 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.77■■□□□ 1.56
PHC3Q8NDX5 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PHC3Q8NDX5 MIR639-201ENST00000384974 98 ntBASIC24.77■■□□□ 1.56
PHC3Q8NDX5 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
PHC3Q8NDX5 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PHC3Q8NDX5 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
PHC3Q8NDX5 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
PHC3Q8NDX5 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.76■■□□□ 1.55
PHC3Q8NDX5 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.76■■□□□ 1.55
PHC3Q8NDX5 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC24.76■■□□□ 1.55
PHC3Q8NDX5 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PHC3Q8NDX5 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PHC3Q8NDX5 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.75■■□□□ 1.55
PHC3Q8NDX5 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC24.75■■□□□ 1.55
PHC3Q8NDX5 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PHC3Q8NDX5 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
PHC3Q8NDX5 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
PHC3Q8NDX5 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PHC3Q8NDX5 DRD5P2-201ENST00000421395 2012 ntBASIC24.74■■□□□ 1.55
PHC3Q8NDX5 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.74■■□□□ 1.55
PHC3Q8NDX5 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PHC3Q8NDX5 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PHC3Q8NDX5 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.74■■□□□ 1.55
PHC3Q8NDX5 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
PHC3Q8NDX5 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
PHC3Q8NDX5 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PHC3Q8NDX5 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PHC3Q8NDX5 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
PHC3Q8NDX5 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
PHC3Q8NDX5 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
PHC3Q8NDX5 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
PHC3Q8NDX5 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
PHC3Q8NDX5 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PHC3Q8NDX5 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
PHC3Q8NDX5 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PHC3Q8NDX5 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PHC3Q8NDX5 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PHC3Q8NDX5 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
PHC3Q8NDX5 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PHC3Q8NDX5 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.7■■□□□ 1.54
PHC3Q8NDX5 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.7■■□□□ 1.54
PHC3Q8NDX5 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PHC3Q8NDX5 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PHC3Q8NDX5 AP002414.2-202ENST00000590929 1450 ntBASIC24.69■■□□□ 1.54
PHC3Q8NDX5 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
PHC3Q8NDX5 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PHC3Q8NDX5 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PHC3Q8NDX5 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PHC3Q8NDX5 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PHC3Q8NDX5 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PHC3Q8NDX5 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PHC3Q8NDX5 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.68■■□□□ 1.54
PHC3Q8NDX5 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PHC3Q8NDX5 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PHC3Q8NDX5 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.67■■□□□ 1.54
PHC3Q8NDX5 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PHC3Q8NDX5 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.67■■□□□ 1.54
PHC3Q8NDX5 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.66■■□□□ 1.54
PHC3Q8NDX5 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PHC3Q8NDX5 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PHC3Q8NDX5 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.65■■□□□ 1.54
PHC3Q8NDX5 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PHC3Q8NDX5 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PHC3Q8NDX5 MIR4449-201ENST00000578365 66 ntBASIC24.64■■□□□ 1.54
PHC3Q8NDX5 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PHC3Q8NDX5 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PHC3Q8NDX5 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PHC3Q8NDX5 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.63■■□□□ 1.53
PHC3Q8NDX5 AC008813.1-201ENST00000536597 885 ntBASIC24.63■■□□□ 1.53
PHC3Q8NDX5 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PHC3Q8NDX5 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.62■■□□□ 1.53
PHC3Q8NDX5 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC24.62■■□□□ 1.53
PHC3Q8NDX5 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PHC3Q8NDX5 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PHC3Q8NDX5 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
PHC3Q8NDX5 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PHC3Q8NDX5 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
PHC3Q8NDX5 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PHC3Q8NDX5 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.61■■□□□ 1.53
PHC3Q8NDX5 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.61■■□□□ 1.53
PHC3Q8NDX5 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
PHC3Q8NDX5 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
PHC3Q8NDX5 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
PHC3Q8NDX5 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.6■■□□□ 1.53
PHC3Q8NDX5 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.6■■□□□ 1.53
PHC3Q8NDX5 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
PHC3Q8NDX5 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PHC3Q8NDX5 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
PHC3Q8NDX5 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PHC3Q8NDX5 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.58■■□□□ 1.52
PHC3Q8NDX5 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.58■■□□□ 1.52
PHC3Q8NDX5 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.57■■□□□ 1.52
PHC3Q8NDX5 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.56■■□□□ 1.52
PHC3Q8NDX5 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PHC3Q8NDX5 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.56■■□□□ 1.52
PHC3Q8NDX5 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.56■■□□□ 1.52
PHC3Q8NDX5 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
PHC3Q8NDX5 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms