Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22.21■■□□□ 1.15
CNEP1R1Q8N9A8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CNEP1R1Q8N9A8 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
CNEP1R1Q8N9A8 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
CNEP1R1Q8N9A8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CNEP1R1Q8N9A8 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CNEP1R1Q8N9A8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CNEP1R1Q8N9A8 AL359258.2-201ENST00000564063 1566 ntBASIC22.19■■□□□ 1.14
CNEP1R1Q8N9A8 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CNEP1R1Q8N9A8 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CNEP1R1Q8N9A8 AC092296.2-201ENST00000589470 999 ntBASIC22.18■■□□□ 1.14
CNEP1R1Q8N9A8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CNEP1R1Q8N9A8 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CNEP1R1Q8N9A8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
CNEP1R1Q8N9A8 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CNEP1R1Q8N9A8 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CNEP1R1Q8N9A8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC22.16■■□□□ 1.14
CNEP1R1Q8N9A8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
CNEP1R1Q8N9A8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.16■■□□□ 1.14
CNEP1R1Q8N9A8 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.16■■□□□ 1.14
CNEP1R1Q8N9A8 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CNEP1R1Q8N9A8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC22.16■■□□□ 1.14
CNEP1R1Q8N9A8 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CNEP1R1Q8N9A8 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CNEP1R1Q8N9A8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CNEP1R1Q8N9A8 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.15■■□□□ 1.14
CNEP1R1Q8N9A8 ECEL1P2-201ENST00000461596 1295 ntBASIC22.15■■□□□ 1.14
CNEP1R1Q8N9A8 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
CNEP1R1Q8N9A8 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CNEP1R1Q8N9A8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CNEP1R1Q8N9A8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CNEP1R1Q8N9A8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.14■■□□□ 1.13
CNEP1R1Q8N9A8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CNEP1R1Q8N9A8 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CNEP1R1Q8N9A8 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
CNEP1R1Q8N9A8 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CNEP1R1Q8N9A8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.13■■□□□ 1.13
CNEP1R1Q8N9A8 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CNEP1R1Q8N9A8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
CNEP1R1Q8N9A8 NTF6A-201ENST00000591175 560 ntBASIC22.12■■□□□ 1.13
CNEP1R1Q8N9A8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.12■■□□□ 1.13
CNEP1R1Q8N9A8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CNEP1R1Q8N9A8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.11■■□□□ 1.13
CNEP1R1Q8N9A8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.11■■□□□ 1.13
CNEP1R1Q8N9A8 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CNEP1R1Q8N9A8 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CNEP1R1Q8N9A8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC22.11■■□□□ 1.13
CNEP1R1Q8N9A8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC22.11■■□□□ 1.13
CNEP1R1Q8N9A8 AL157400.5-201ENST00000507624 621 ntBASIC22.11■■□□□ 1.13
CNEP1R1Q8N9A8 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
CNEP1R1Q8N9A8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
CNEP1R1Q8N9A8 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
CNEP1R1Q8N9A8 AC018358.1-201ENST00000631079 1402 ntBASIC22.1■■□□□ 1.13
CNEP1R1Q8N9A8 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CNEP1R1Q8N9A8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CNEP1R1Q8N9A8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
CNEP1R1Q8N9A8 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.09■■□□□ 1.13
CNEP1R1Q8N9A8 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.09■■□□□ 1.13
CNEP1R1Q8N9A8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.09■■□□□ 1.13
CNEP1R1Q8N9A8 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CNEP1R1Q8N9A8 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.08■■□□□ 1.13
CNEP1R1Q8N9A8 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.08■■□□□ 1.12
CNEP1R1Q8N9A8 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.07■■□□□ 1.12
CNEP1R1Q8N9A8 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
CNEP1R1Q8N9A8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
CNEP1R1Q8N9A8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CNEP1R1Q8N9A8 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CNEP1R1Q8N9A8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CNEP1R1Q8N9A8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CNEP1R1Q8N9A8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
CNEP1R1Q8N9A8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CNEP1R1Q8N9A8 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
CNEP1R1Q8N9A8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.07■■□□□ 1.12
CNEP1R1Q8N9A8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CNEP1R1Q8N9A8 DRD5P2-201ENST00000421395 2012 ntBASIC22.06■■□□□ 1.12
CNEP1R1Q8N9A8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CNEP1R1Q8N9A8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
CNEP1R1Q8N9A8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CNEP1R1Q8N9A8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.05■■□□□ 1.12
CNEP1R1Q8N9A8 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC22.05■■□□□ 1.12
CNEP1R1Q8N9A8 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
CNEP1R1Q8N9A8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
CNEP1R1Q8N9A8 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CNEP1R1Q8N9A8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.04■■□□□ 1.12
CNEP1R1Q8N9A8 U85056.1-201ENST00000616429 682 ntBASIC22.04■■□□□ 1.12
CNEP1R1Q8N9A8 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CNEP1R1Q8N9A8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.04■■□□□ 1.12
CNEP1R1Q8N9A8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CNEP1R1Q8N9A8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CNEP1R1Q8N9A8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CNEP1R1Q8N9A8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CNEP1R1Q8N9A8 SMPD5-203ENST00000639008 1464 ntBASIC22.03■■□□□ 1.12
CNEP1R1Q8N9A8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
CNEP1R1Q8N9A8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.02■■□□□ 1.12
CNEP1R1Q8N9A8 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
CNEP1R1Q8N9A8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CNEP1R1Q8N9A8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.01■■□□□ 1.11
CNEP1R1Q8N9A8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CNEP1R1Q8N9A8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
CNEP1R1Q8N9A8 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms