Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
CPSF7Q8N684 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.31■■□□□ 1.48
CPSF7Q8N684 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
CPSF7Q8N684 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.29■■□□□ 1.48
CPSF7Q8N684 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CPSF7Q8N684 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.29■■□□□ 1.48
CPSF7Q8N684 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CPSF7Q8N684 MIR6090-201ENST00000622481 60 ntBASIC24.29■■□□□ 1.48
CPSF7Q8N684 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
CPSF7Q8N684 AC108673.1-201ENST00000510422 1159 ntBASIC24.28■■□□□ 1.48
CPSF7Q8N684 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.28■■□□□ 1.48
CPSF7Q8N684 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
CPSF7Q8N684 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CPSF7Q8N684 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
CPSF7Q8N684 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.26■■□□□ 1.47
CPSF7Q8N684 AC020928.2-201ENST00000588717 2197 ntBASIC24.26■■□□□ 1.47
CPSF7Q8N684 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CPSF7Q8N684 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
CPSF7Q8N684 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CPSF7Q8N684 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.26■■□□□ 1.47
CPSF7Q8N684 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CPSF7Q8N684 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.25■■□□□ 1.47
CPSF7Q8N684 AC021231.2-201ENST00000594613 730 ntBASIC24.25■■□□□ 1.47
CPSF7Q8N684 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
CPSF7Q8N684 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CPSF7Q8N684 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CPSF7Q8N684 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.24■■□□□ 1.47
CPSF7Q8N684 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.24■■□□□ 1.47
CPSF7Q8N684 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CPSF7Q8N684 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CPSF7Q8N684 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
CPSF7Q8N684 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CPSF7Q8N684 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.23■■□□□ 1.47
CPSF7Q8N684 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.23■■□□□ 1.47
CPSF7Q8N684 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.23■■□□□ 1.47
CPSF7Q8N684 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CPSF7Q8N684 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CPSF7Q8N684 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CPSF7Q8N684 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CPSF7Q8N684 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CPSF7Q8N684 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CPSF7Q8N684 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CPSF7Q8N684 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.21■■□□□ 1.47
CPSF7Q8N684 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
CPSF7Q8N684 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.2■■□□□ 1.47
CPSF7Q8N684 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CPSF7Q8N684 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
CPSF7Q8N684 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
CPSF7Q8N684 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
CPSF7Q8N684 AC135983.2-203ENST00000454486 1613 ntBASIC24.2■■□□□ 1.46
CPSF7Q8N684 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CPSF7Q8N684 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CPSF7Q8N684 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.19■■□□□ 1.46
CPSF7Q8N684 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
CPSF7Q8N684 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CPSF7Q8N684 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
CPSF7Q8N684 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CPSF7Q8N684 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.18■■□□□ 1.46
CPSF7Q8N684 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
CPSF7Q8N684 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
CPSF7Q8N684 HLA-V-202ENST00000446817 847 ntBASIC24.18■■□□□ 1.46
CPSF7Q8N684 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.18■■□□□ 1.46
CPSF7Q8N684 DUSP8P4-201ENST00000399538 1761 ntBASIC24.18■■□□□ 1.46
CPSF7Q8N684 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CPSF7Q8N684 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CPSF7Q8N684 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CPSF7Q8N684 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CPSF7Q8N684 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.17■■□□□ 1.46
CPSF7Q8N684 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
CPSF7Q8N684 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
CPSF7Q8N684 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CPSF7Q8N684 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CPSF7Q8N684 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CPSF7Q8N684 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
CPSF7Q8N684 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CPSF7Q8N684 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CPSF7Q8N684 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.15■■□□□ 1.46
CPSF7Q8N684 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CPSF7Q8N684 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CPSF7Q8N684 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CPSF7Q8N684 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.14■■□□□ 1.45
CPSF7Q8N684 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.14■■□□□ 1.45
CPSF7Q8N684 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CPSF7Q8N684 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CPSF7Q8N684 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
CPSF7Q8N684 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
CPSF7Q8N684 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CPSF7Q8N684 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CPSF7Q8N684 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
CPSF7Q8N684 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.12■■□□□ 1.45
CPSF7Q8N684 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
CPSF7Q8N684 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CPSF7Q8N684 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.12■■□□□ 1.45
CPSF7Q8N684 AC092803.2-201ENST00000564287 1899 ntBASIC24.11■■□□□ 1.45
CPSF7Q8N684 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
CPSF7Q8N684 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.11■■□□□ 1.45
CPSF7Q8N684 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CPSF7Q8N684 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.1■■□□□ 1.45
CPSF7Q8N684 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
CPSF7Q8N684 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms