Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.03■■□□□ 1.44
COL27A1Q8IZC6 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL27A1Q8IZC6 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.02■■□□□ 1.44
COL27A1Q8IZC6 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL27A1Q8IZC6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.02■■□□□ 1.44
COL27A1Q8IZC6 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC24.02■■□□□ 1.44
COL27A1Q8IZC6 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.43
COL27A1Q8IZC6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL27A1Q8IZC6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
COL27A1Q8IZC6 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.01■■□□□ 1.43
COL27A1Q8IZC6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL27A1Q8IZC6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
COL27A1Q8IZC6 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL27A1Q8IZC6 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL27A1Q8IZC6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.01■■□□□ 1.43
COL27A1Q8IZC6 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24■■□□□ 1.43
COL27A1Q8IZC6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL27A1Q8IZC6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24■■□□□ 1.43
COL27A1Q8IZC6 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24■■□□□ 1.43
COL27A1Q8IZC6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC24■■□□□ 1.43
COL27A1Q8IZC6 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC23.99■■□□□ 1.43
COL27A1Q8IZC6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL27A1Q8IZC6 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.99■■□□□ 1.43
COL27A1Q8IZC6 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.99■■□□□ 1.43
COL27A1Q8IZC6 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL27A1Q8IZC6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.99■■□□□ 1.43
COL27A1Q8IZC6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.98■■□□□ 1.43
COL27A1Q8IZC6 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL27A1Q8IZC6 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.98■■□□□ 1.43
COL27A1Q8IZC6 AC026202.3-201ENST00000600805 1127 ntBASIC23.98■■□□□ 1.43
COL27A1Q8IZC6 SMPD5-203ENST00000639008 1464 ntBASIC23.98■■□□□ 1.43
COL27A1Q8IZC6 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL27A1Q8IZC6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL27A1Q8IZC6 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
COL27A1Q8IZC6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
COL27A1Q8IZC6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL27A1Q8IZC6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.98■■□□□ 1.43
COL27A1Q8IZC6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
COL27A1Q8IZC6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
COL27A1Q8IZC6 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
COL27A1Q8IZC6 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.96■■□□□ 1.43
COL27A1Q8IZC6 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL27A1Q8IZC6 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL27A1Q8IZC6 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.96■■□□□ 1.43
COL27A1Q8IZC6 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
COL27A1Q8IZC6 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.43
COL27A1Q8IZC6 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL27A1Q8IZC6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
COL27A1Q8IZC6 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL27A1Q8IZC6 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.95■■□□□ 1.42
COL27A1Q8IZC6 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL27A1Q8IZC6 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL27A1Q8IZC6 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL27A1Q8IZC6 DUX4L18-201ENST00000553347 1267 ntBASIC23.94■■□□□ 1.42
COL27A1Q8IZC6 AL359258.2-201ENST00000564063 1566 ntBASIC23.93■■□□□ 1.42
COL27A1Q8IZC6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL27A1Q8IZC6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
COL27A1Q8IZC6 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL27A1Q8IZC6 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.93■■□□□ 1.42
COL27A1Q8IZC6 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
COL27A1Q8IZC6 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
COL27A1Q8IZC6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.92■■□□□ 1.42
COL27A1Q8IZC6 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
COL27A1Q8IZC6 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL27A1Q8IZC6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL27A1Q8IZC6 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL27A1Q8IZC6 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.9■■□□□ 1.42
COL27A1Q8IZC6 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.9■■□□□ 1.42
COL27A1Q8IZC6 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.9■■□□□ 1.42
COL27A1Q8IZC6 RP9P-202ENST00000450133 1212 ntBASIC23.9■■□□□ 1.42
COL27A1Q8IZC6 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
COL27A1Q8IZC6 AL035685.1-201ENST00000636663 812 ntBASIC23.9■■□□□ 1.42
COL27A1Q8IZC6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.89■■□□□ 1.42
COL27A1Q8IZC6 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
COL27A1Q8IZC6 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL27A1Q8IZC6 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL27A1Q8IZC6 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
COL27A1Q8IZC6 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL27A1Q8IZC6 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
COL27A1Q8IZC6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
COL27A1Q8IZC6 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL27A1Q8IZC6 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.88■■□□□ 1.41
COL27A1Q8IZC6 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.88■■□□□ 1.41
COL27A1Q8IZC6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.87■■□□□ 1.41
COL27A1Q8IZC6 ABCB10P3-201ENST00000561950 2166 ntBASIC23.87■■□□□ 1.41
COL27A1Q8IZC6 AP002414.2-202ENST00000590929 1450 ntBASIC23.86■■□□□ 1.41
COL27A1Q8IZC6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
COL27A1Q8IZC6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.86■■□□□ 1.41
COL27A1Q8IZC6 PVT1_1.1-201ENST00000615125 194 ntBASIC23.86■■□□□ 1.41
COL27A1Q8IZC6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
COL27A1Q8IZC6 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.86■■□□□ 1.41
COL27A1Q8IZC6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL27A1Q8IZC6 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
COL27A1Q8IZC6 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC23.85■■□□□ 1.41
COL27A1Q8IZC6 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL27A1Q8IZC6 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.85■■□□□ 1.41
COL27A1Q8IZC6 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL27A1Q8IZC6 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL27A1Q8IZC6 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
COL27A1Q8IZC6 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms