Protein–RNA interactions for Protein: Q86YD7

FAM90A1, Protein FAM90A1, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A1Q86YD7 MIR4449-201ENST00000578365 66 ntBASIC21.02■□□□□ 0.96
FAM90A1Q86YD7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FAM90A1Q86YD7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
FAM90A1Q86YD7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
FAM90A1Q86YD7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
FAM90A1Q86YD7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FAM90A1Q86YD7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.01■□□□□ 0.95
FAM90A1Q86YD7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
FAM90A1Q86YD7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
FAM90A1Q86YD7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FAM90A1Q86YD7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21■□□□□ 0.95
FAM90A1Q86YD7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21■□□□□ 0.95
FAM90A1Q86YD7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
FAM90A1Q86YD7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
FAM90A1Q86YD7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
FAM90A1Q86YD7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FAM90A1Q86YD7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
FAM90A1Q86YD7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
FAM90A1Q86YD7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FAM90A1Q86YD7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
FAM90A1Q86YD7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FAM90A1Q86YD7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FAM90A1Q86YD7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.98■□□□□ 0.95
FAM90A1Q86YD7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FAM90A1Q86YD7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FAM90A1Q86YD7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FAM90A1Q86YD7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
FAM90A1Q86YD7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
FAM90A1Q86YD7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
FAM90A1Q86YD7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FAM90A1Q86YD7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FAM90A1Q86YD7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FAM90A1Q86YD7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FAM90A1Q86YD7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FAM90A1Q86YD7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
FAM90A1Q86YD7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
FAM90A1Q86YD7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
FAM90A1Q86YD7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.96■□□□□ 0.95
FAM90A1Q86YD7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FAM90A1Q86YD7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
FAM90A1Q86YD7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
FAM90A1Q86YD7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
FAM90A1Q86YD7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
FAM90A1Q86YD7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FAM90A1Q86YD7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
FAM90A1Q86YD7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.95■□□□□ 0.94
FAM90A1Q86YD7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
FAM90A1Q86YD7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FAM90A1Q86YD7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
FAM90A1Q86YD7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
FAM90A1Q86YD7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.94■□□□□ 0.94
FAM90A1Q86YD7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FAM90A1Q86YD7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.94■□□□□ 0.94
FAM90A1Q86YD7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
FAM90A1Q86YD7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
FAM90A1Q86YD7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
FAM90A1Q86YD7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
FAM90A1Q86YD7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.93■□□□□ 0.94
FAM90A1Q86YD7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.93■□□□□ 0.94
FAM90A1Q86YD7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
FAM90A1Q86YD7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
FAM90A1Q86YD7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FAM90A1Q86YD7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FAM90A1Q86YD7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FAM90A1Q86YD7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.92■□□□□ 0.94
FAM90A1Q86YD7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FAM90A1Q86YD7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FAM90A1Q86YD7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
FAM90A1Q86YD7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FAM90A1Q86YD7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.92■□□□□ 0.94
FAM90A1Q86YD7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FAM90A1Q86YD7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
FAM90A1Q86YD7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FAM90A1Q86YD7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FAM90A1Q86YD7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
FAM90A1Q86YD7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.91■□□□□ 0.94
FAM90A1Q86YD7 AL121749.1-202ENST00000609313 2153 ntBASIC20.91■□□□□ 0.94
FAM90A1Q86YD7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.9■□□□□ 0.94
FAM90A1Q86YD7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FAM90A1Q86YD7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.9■□□□□ 0.94
FAM90A1Q86YD7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.9■□□□□ 0.94
FAM90A1Q86YD7 WHAMMP3-201ENST00000611636 1609 ntBASIC20.9■□□□□ 0.94
FAM90A1Q86YD7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
FAM90A1Q86YD7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FAM90A1Q86YD7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.9■□□□□ 0.94
FAM90A1Q86YD7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.9■□□□□ 0.94
FAM90A1Q86YD7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
FAM90A1Q86YD7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
FAM90A1Q86YD7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
FAM90A1Q86YD7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
FAM90A1Q86YD7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
FAM90A1Q86YD7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.89■□□□□ 0.93
FAM90A1Q86YD7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
FAM90A1Q86YD7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FAM90A1Q86YD7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
FAM90A1Q86YD7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FAM90A1Q86YD7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
FAM90A1Q86YD7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.88■□□□□ 0.93
FAM90A1Q86YD7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FAM90A1Q86YD7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms