Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
ZC3HC1Q86WB0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.81■■□□□ 1.56
ZC3HC1Q86WB0 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.81■■□□□ 1.56
ZC3HC1Q86WB0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
ZC3HC1Q86WB0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.81■■□□□ 1.56
ZC3HC1Q86WB0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.81■■□□□ 1.56
ZC3HC1Q86WB0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.8■■□□□ 1.56
ZC3HC1Q86WB0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.8■■□□□ 1.56
ZC3HC1Q86WB0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.79■■□□□ 1.56
ZC3HC1Q86WB0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
ZC3HC1Q86WB0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.79■■□□□ 1.56
ZC3HC1Q86WB0 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.79■■□□□ 1.56
ZC3HC1Q86WB0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
ZC3HC1Q86WB0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ZC3HC1Q86WB0 AC091060.1-201ENST00000623524 1766 ntBASIC24.78■■□□□ 1.56
ZC3HC1Q86WB0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
ZC3HC1Q86WB0 RPS2P35-201ENST00000443417 897 ntBASIC24.78■■□□□ 1.56
ZC3HC1Q86WB0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.77■■□□□ 1.56
ZC3HC1Q86WB0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
ZC3HC1Q86WB0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.76■■□□□ 1.55
ZC3HC1Q86WB0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
ZC3HC1Q86WB0 AP004609.3-201ENST00000610705 1884 ntBASIC24.75■■□□□ 1.55
ZC3HC1Q86WB0 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
ZC3HC1Q86WB0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.75■■□□□ 1.55
ZC3HC1Q86WB0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.74■■□□□ 1.55
ZC3HC1Q86WB0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.74■■□□□ 1.55
ZC3HC1Q86WB0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.74■■□□□ 1.55
ZC3HC1Q86WB0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
ZC3HC1Q86WB0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
ZC3HC1Q86WB0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
ZC3HC1Q86WB0 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.72■■□□□ 1.55
ZC3HC1Q86WB0 WHAMMP3-201ENST00000611636 1609 ntBASIC24.71■■□□□ 1.55
ZC3HC1Q86WB0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.71■■□□□ 1.55
ZC3HC1Q86WB0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ZC3HC1Q86WB0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ZC3HC1Q86WB0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.7■■□□□ 1.54
ZC3HC1Q86WB0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.7■■□□□ 1.54
ZC3HC1Q86WB0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.54
ZC3HC1Q86WB0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ZC3HC1Q86WB0 LINC01971-201ENST00000617888 1048 ntBASIC24.69■■□□□ 1.54
ZC3HC1Q86WB0 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.69■■□□□ 1.54
ZC3HC1Q86WB0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
ZC3HC1Q86WB0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ZC3HC1Q86WB0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
ZC3HC1Q86WB0 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.68■■□□□ 1.54
ZC3HC1Q86WB0 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.68■■□□□ 1.54
ZC3HC1Q86WB0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ZC3HC1Q86WB0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
ZC3HC1Q86WB0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
ZC3HC1Q86WB0 AC142472.1-201ENST00000612013 1741 ntBASIC24.66■■□□□ 1.54
ZC3HC1Q86WB0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.66■■□□□ 1.54
ZC3HC1Q86WB0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZC3HC1Q86WB0 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZC3HC1Q86WB0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
ZC3HC1Q86WB0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.66■■□□□ 1.54
ZC3HC1Q86WB0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZC3HC1Q86WB0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
ZC3HC1Q86WB0 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
ZC3HC1Q86WB0 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
ZC3HC1Q86WB0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
ZC3HC1Q86WB0 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
ZC3HC1Q86WB0 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
ZC3HC1Q86WB0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
ZC3HC1Q86WB0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
ZC3HC1Q86WB0 AC145676.1-201ENST00000514988 2004 ntBASIC24.64■■□□□ 1.54
ZC3HC1Q86WB0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.64■■□□□ 1.54
ZC3HC1Q86WB0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
ZC3HC1Q86WB0 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
ZC3HC1Q86WB0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
ZC3HC1Q86WB0 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.54
ZC3HC1Q86WB0 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
ZC3HC1Q86WB0 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ZC3HC1Q86WB0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.63■■□□□ 1.53
ZC3HC1Q86WB0 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
ZC3HC1Q86WB0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.63■■□□□ 1.53
ZC3HC1Q86WB0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
ZC3HC1Q86WB0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ZC3HC1Q86WB0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
ZC3HC1Q86WB0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
ZC3HC1Q86WB0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
ZC3HC1Q86WB0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
ZC3HC1Q86WB0 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.61■■□□□ 1.53
ZC3HC1Q86WB0 DUX4L13-201ENST00000554103 1267 ntBASIC24.61■■□□□ 1.53
ZC3HC1Q86WB0 DUX4L15-201ENST00000611059 1267 ntBASIC24.61■■□□□ 1.53
ZC3HC1Q86WB0 DUX4L23-201ENST00000615195 1269 ntBASIC24.61■■□□□ 1.53
ZC3HC1Q86WB0 DUX4L24-201ENST00000617576 1269 ntBASIC24.61■■□□□ 1.53
ZC3HC1Q86WB0 DUX4L22-201ENST00000618238 1269 ntBASIC24.61■■□□□ 1.53
ZC3HC1Q86WB0 DUX4L20-201ENST00000619712 1269 ntBASIC24.61■■□□□ 1.53
ZC3HC1Q86WB0 DUX4L21-201ENST00000622058 1269 ntBASIC24.61■■□□□ 1.53
ZC3HC1Q86WB0 DUX4L10-201ENST00000622460 1267 ntBASIC24.61■■□□□ 1.53
ZC3HC1Q86WB0 DUX4L25-201ENST00000624915 1269 ntBASIC24.61■■□□□ 1.53
ZC3HC1Q86WB0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
ZC3HC1Q86WB0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.6■■□□□ 1.53
ZC3HC1Q86WB0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
ZC3HC1Q86WB0 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
ZC3HC1Q86WB0 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
ZC3HC1Q86WB0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
ZC3HC1Q86WB0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
ZC3HC1Q86WB0 AC092803.2-201ENST00000564287 1899 ntBASIC24.59■■□□□ 1.53
ZC3HC1Q86WB0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms