Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM4SF20Q53R12 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM4SF20Q53R12 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM4SF20Q53R12 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TM4SF20Q53R12 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.23■□□□□ 0.67
TM4SF20Q53R12 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM4SF20Q53R12 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM4SF20Q53R12 LINC01003-201ENST00000564834 1764 ntBASIC19.22■□□□□ 0.67
TM4SF20Q53R12 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TM4SF20Q53R12 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF20Q53R12 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.22■□□□□ 0.67
TM4SF20Q53R12 AC018358.1-201ENST00000631079 1402 ntBASIC19.22■□□□□ 0.67
TM4SF20Q53R12 BX255925.1-201ENST00000566954 1854 ntBASIC19.22■□□□□ 0.67
TM4SF20Q53R12 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF20Q53R12 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF20Q53R12 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.21■□□□□ 0.67
TM4SF20Q53R12 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.21■□□□□ 0.67
TM4SF20Q53R12 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.21■□□□□ 0.67
TM4SF20Q53R12 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF20Q53R12 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM4SF20Q53R12 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM4SF20Q53R12 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM4SF20Q53R12 HLA-V-202ENST00000446817 847 ntBASIC19.2■□□□□ 0.66
TM4SF20Q53R12 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TM4SF20Q53R12 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM4SF20Q53R12 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TM4SF20Q53R12 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TM4SF20Q53R12 AC008813.1-201ENST00000536597 885 ntBASIC19.19■□□□□ 0.66
TM4SF20Q53R12 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.19■□□□□ 0.66
TM4SF20Q53R12 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TM4SF20Q53R12 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TM4SF20Q53R12 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM4SF20Q53R12 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM4SF20Q53R12 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.18■□□□□ 0.66
TM4SF20Q53R12 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM4SF20Q53R12 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.18■□□□□ 0.66
TM4SF20Q53R12 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM4SF20Q53R12 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.18■□□□□ 0.66
TM4SF20Q53R12 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TM4SF20Q53R12 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TM4SF20Q53R12 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TM4SF20Q53R12 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.17■□□□□ 0.66
TM4SF20Q53R12 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
TM4SF20Q53R12 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TM4SF20Q53R12 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM4SF20Q53R12 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM4SF20Q53R12 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM4SF20Q53R12 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TM4SF20Q53R12 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.16■□□□□ 0.66
TM4SF20Q53R12 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TM4SF20Q53R12 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TM4SF20Q53R12 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TM4SF20Q53R12 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
TM4SF20Q53R12 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TM4SF20Q53R12 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.15■□□□□ 0.66
TM4SF20Q53R12 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
TM4SF20Q53R12 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TM4SF20Q53R12 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM4SF20Q53R12 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM4SF20Q53R12 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TM4SF20Q53R12 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.14■□□□□ 0.65
TM4SF20Q53R12 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM4SF20Q53R12 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TM4SF20Q53R12 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF20Q53R12 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.13■□□□□ 0.65
TM4SF20Q53R12 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.13■□□□□ 0.65
TM4SF20Q53R12 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF20Q53R12 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF20Q53R12 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
TM4SF20Q53R12 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM4SF20Q53R12 MIR639-201ENST00000384974 98 ntBASIC19.12■□□□□ 0.65
TM4SF20Q53R12 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TM4SF20Q53R12 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM4SF20Q53R12 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TM4SF20Q53R12 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.12■□□□□ 0.65
TM4SF20Q53R12 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TM4SF20Q53R12 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.11■□□□□ 0.65
TM4SF20Q53R12 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM4SF20Q53R12 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM4SF20Q53R12 MIR219A2-201ENST00000608502 1504 ntBASIC19.1■□□□□ 0.65
TM4SF20Q53R12 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TM4SF20Q53R12 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
TM4SF20Q53R12 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.1■□□□□ 0.65
TM4SF20Q53R12 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
TM4SF20Q53R12 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TM4SF20Q53R12 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TM4SF20Q53R12 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TM4SF20Q53R12 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TM4SF20Q53R12 AC148477.6-201ENST00000623746 465 ntBASIC19.08■□□□□ 0.64
TM4SF20Q53R12 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.07■□□□□ 0.64
TM4SF20Q53R12 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
TM4SF20Q53R12 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TM4SF20Q53R12 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TM4SF20Q53R12 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TM4SF20Q53R12 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.07■□□□□ 0.64
TM4SF20Q53R12 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.07■□□□□ 0.64
TM4SF20Q53R12 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
TM4SF20Q53R12 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TM4SF20Q53R12 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.07■□□□□ 0.64
TM4SF20Q53R12 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms