Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 CR559946.2-201ENST00000623684 991 ntBASIC23.48■■□□□ 1.35
RPP38P78345 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RPP38P78345 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.47■■□□□ 1.35
RPP38P78345 LINC01003-201ENST00000564834 1764 ntBASIC23.47■■□□□ 1.35
RPP38P78345 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.47■■□□□ 1.35
RPP38P78345 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
RPP38P78345 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.47■■□□□ 1.35
RPP38P78345 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.47■■□□□ 1.35
RPP38P78345 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.47■■□□□ 1.35
RPP38P78345 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RPP38P78345 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RPP38P78345 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.46■■□□□ 1.35
RPP38P78345 AC016575.1-201ENST00000607026 382 ntBASIC23.46■■□□□ 1.35
RPP38P78345 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
RPP38P78345 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
RPP38P78345 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.45■■□□□ 1.35
RPP38P78345 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.45■■□□□ 1.34
RPP38P78345 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
RPP38P78345 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RPP38P78345 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.44■■□□□ 1.34
RPP38P78345 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
RPP38P78345 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.44■■□□□ 1.34
RPP38P78345 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RPP38P78345 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.43■■□□□ 1.34
RPP38P78345 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RPP38P78345 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.43■■□□□ 1.34
RPP38P78345 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RPP38P78345 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.43■■□□□ 1.34
RPP38P78345 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RPP38P78345 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.42■■□□□ 1.34
RPP38P78345 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.42■■□□□ 1.34
RPP38P78345 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RPP38P78345 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RPP38P78345 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.42■■□□□ 1.34
RPP38P78345 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
RPP38P78345 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.42■■□□□ 1.34
RPP38P78345 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RPP38P78345 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
RPP38P78345 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RPP38P78345 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RPP38P78345 MIR639-201ENST00000384974 98 ntBASIC23.41■■□□□ 1.34
RPP38P78345 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.41■■□□□ 1.34
RPP38P78345 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.41■■□□□ 1.34
RPP38P78345 AL449106.1-201ENST00000608517 1980 ntBASIC23.41■■□□□ 1.34
RPP38P78345 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.41■■□□□ 1.34
RPP38P78345 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
RPP38P78345 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RPP38P78345 AC110285.7-201ENST00000624417 1536 ntBASIC23.4■■□□□ 1.34
RPP38P78345 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
RPP38P78345 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.4■■□□□ 1.34
RPP38P78345 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.39■■□□□ 1.34
RPP38P78345 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
RPP38P78345 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.39■■□□□ 1.33
RPP38P78345 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.39■■□□□ 1.33
RPP38P78345 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RPP38P78345 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.38■■□□□ 1.33
RPP38P78345 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.38■■□□□ 1.33
RPP38P78345 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RPP38P78345 AC008813.1-201ENST00000536597 885 ntBASIC23.37■■□□□ 1.33
RPP38P78345 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.36■■□□□ 1.33
RPP38P78345 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.36■■□□□ 1.33
RPP38P78345 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
RPP38P78345 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RPP38P78345 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
RPP38P78345 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RPP38P78345 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RPP38P78345 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.34■■□□□ 1.33
RPP38P78345 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RPP38P78345 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RPP38P78345 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RPP38P78345 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
RPP38P78345 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RPP38P78345 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RPP38P78345 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
RPP38P78345 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.32■■□□□ 1.32
RPP38P78345 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
RPP38P78345 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.32■■□□□ 1.32
RPP38P78345 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RPP38P78345 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.32■■□□□ 1.32
RPP38P78345 AC100797.4-201ENST00000631653 1827 ntBASIC23.31■■□□□ 1.32
RPP38P78345 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.31■■□□□ 1.32
RPP38P78345 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RPP38P78345 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
RPP38P78345 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
RPP38P78345 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RPP38P78345 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.3■■□□□ 1.32
RPP38P78345 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.3■■□□□ 1.32
RPP38P78345 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RPP38P78345 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
RPP38P78345 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RPP38P78345 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RPP38P78345 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RPP38P78345 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
RPP38P78345 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RPP38P78345 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RPP38P78345 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RPP38P78345 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RPP38P78345 MIR4449-201ENST00000578365 66 ntBASIC23.28■■□□□ 1.32
RPP38P78345 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
RPP38P78345 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms