Protein–RNA interactions for Protein: P63027

VAMP2, Vesicle-associated membrane protein 2, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2P63027 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VAMP2P63027 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
VAMP2P63027 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.31■□□□□ 0.84
VAMP2P63027 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VAMP2P63027 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
VAMP2P63027 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VAMP2P63027 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
VAMP2P63027 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VAMP2P63027 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.3■□□□□ 0.84
VAMP2P63027 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VAMP2P63027 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VAMP2P63027 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VAMP2P63027 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.3■□□□□ 0.84
VAMP2P63027 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VAMP2P63027 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VAMP2P63027 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VAMP2P63027 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VAMP2P63027 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VAMP2P63027 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
VAMP2P63027 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.29■□□□□ 0.84
VAMP2P63027 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VAMP2P63027 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VAMP2P63027 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VAMP2P63027 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VAMP2P63027 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.28■□□□□ 0.84
VAMP2P63027 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VAMP2P63027 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VAMP2P63027 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.28■□□□□ 0.84
VAMP2P63027 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VAMP2P63027 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.28■□□□□ 0.84
VAMP2P63027 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VAMP2P63027 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VAMP2P63027 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
VAMP2P63027 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VAMP2P63027 AC018358.1-201ENST00000631079 1402 ntBASIC20.27■□□□□ 0.84
VAMP2P63027 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.27■□□□□ 0.84
VAMP2P63027 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
VAMP2P63027 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VAMP2P63027 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.26■□□□□ 0.83
VAMP2P63027 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VAMP2P63027 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
VAMP2P63027 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
VAMP2P63027 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
VAMP2P63027 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
VAMP2P63027 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
VAMP2P63027 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
VAMP2P63027 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VAMP2P63027 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
VAMP2P63027 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VAMP2P63027 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.25■□□□□ 0.83
VAMP2P63027 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VAMP2P63027 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VAMP2P63027 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
VAMP2P63027 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.25■□□□□ 0.83
VAMP2P63027 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.24■□□□□ 0.83
VAMP2P63027 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VAMP2P63027 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.24■□□□□ 0.83
VAMP2P63027 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.24■□□□□ 0.83
VAMP2P63027 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VAMP2P63027 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VAMP2P63027 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.23■□□□□ 0.83
VAMP2P63027 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
VAMP2P63027 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VAMP2P63027 DUSP8P4-201ENST00000399538 1761 ntBASIC20.23■□□□□ 0.83
VAMP2P63027 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VAMP2P63027 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VAMP2P63027 AC092803.2-201ENST00000564287 1899 ntBASIC20.22■□□□□ 0.83
VAMP2P63027 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.22■□□□□ 0.83
VAMP2P63027 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.22■□□□□ 0.83
VAMP2P63027 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
VAMP2P63027 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.22■□□□□ 0.83
VAMP2P63027 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VAMP2P63027 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
VAMP2P63027 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VAMP2P63027 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.22■□□□□ 0.83
VAMP2P63027 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
VAMP2P63027 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
VAMP2P63027 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.21■□□□□ 0.83
VAMP2P63027 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
VAMP2P63027 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
VAMP2P63027 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
VAMP2P63027 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VAMP2P63027 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VAMP2P63027 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
VAMP2P63027 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.2■□□□□ 0.82
VAMP2P63027 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
VAMP2P63027 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VAMP2P63027 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.19■□□□□ 0.82
VAMP2P63027 AC093323.1-202ENST00000635031 2045 ntBASIC20.19■□□□□ 0.82
VAMP2P63027 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VAMP2P63027 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VAMP2P63027 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.19■□□□□ 0.82
VAMP2P63027 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.18■□□□□ 0.82
VAMP2P63027 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
VAMP2P63027 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
VAMP2P63027 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VAMP2P63027 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.17■□□□□ 0.82
VAMP2P63027 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.17■□□□□ 0.82
VAMP2P63027 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
VAMP2P63027 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms