Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CLDN12P56749 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLDN12P56749 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CLDN12P56749 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLDN12P56749 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.57■■□□□ 1.04
CLDN12P56749 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CLDN12P56749 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.57■■□□□ 1.04
CLDN12P56749 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLDN12P56749 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLDN12P56749 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.56■■□□□ 1.04
CLDN12P56749 AC136428.2-201ENST00000563187 214 ntBASIC21.56■■□□□ 1.04
CLDN12P56749 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLDN12P56749 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.56■■□□□ 1.04
CLDN12P56749 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.55■■□□□ 1.04
CLDN12P56749 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLDN12P56749 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.55■■□□□ 1.04
CLDN12P56749 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLDN12P56749 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLDN12P56749 AC092803.2-201ENST00000564287 1899 ntBASIC21.55■■□□□ 1.04
CLDN12P56749 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLDN12P56749 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLDN12P56749 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLDN12P56749 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.54■■□□□ 1.04
CLDN12P56749 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CLDN12P56749 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLDN12P56749 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CLDN12P56749 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CLDN12P56749 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLDN12P56749 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLDN12P56749 DUSP8P4-201ENST00000399538 1761 ntBASIC21.53■■□□□ 1.04
CLDN12P56749 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.53■■□□□ 1.04
CLDN12P56749 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.53■■□□□ 1.04
CLDN12P56749 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CLDN12P56749 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CLDN12P56749 MIR762-201ENST00000390236 83 ntBASIC21.52■■□□□ 1.04
CLDN12P56749 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CLDN12P56749 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLDN12P56749 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.51■■□□□ 1.03
CLDN12P56749 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.51■■□□□ 1.03
CLDN12P56749 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.51■■□□□ 1.03
CLDN12P56749 AC097358.2-201ENST00000607541 1159 ntBASIC21.51■■□□□ 1.03
CLDN12P56749 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLDN12P56749 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLDN12P56749 AP004609.3-201ENST00000610705 1884 ntBASIC21.51■■□□□ 1.03
CLDN12P56749 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
CLDN12P56749 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.51■■□□□ 1.03
CLDN12P56749 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.5■■□□□ 1.03
CLDN12P56749 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.5■■□□□ 1.03
CLDN12P56749 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CLDN12P56749 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLDN12P56749 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLDN12P56749 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLDN12P56749 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CLDN12P56749 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CLDN12P56749 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CLDN12P56749 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
CLDN12P56749 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLDN12P56749 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLDN12P56749 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CLDN12P56749 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CLDN12P56749 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.47■■□□□ 1.03
CLDN12P56749 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.47■■□□□ 1.03
CLDN12P56749 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CLDN12P56749 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLDN12P56749 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLDN12P56749 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLDN12P56749 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN12P56749 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN12P56749 AC093323.1-202ENST00000635031 2045 ntBASIC21.46■■□□□ 1.03
CLDN12P56749 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.45■■□□□ 1.02
CLDN12P56749 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CLDN12P56749 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN12P56749 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN12P56749 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN12P56749 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.44■■□□□ 1.02
CLDN12P56749 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN12P56749 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN12P56749 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN12P56749 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN12P56749 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLDN12P56749 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.43■■□□□ 1.02
CLDN12P56749 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CLDN12P56749 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CLDN12P56749 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CLDN12P56749 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CLDN12P56749 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.43■■□□□ 1.02
CLDN12P56749 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
CLDN12P56749 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLDN12P56749 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.42■■□□□ 1.02
CLDN12P56749 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLDN12P56749 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CLDN12P56749 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
CLDN12P56749 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLDN12P56749 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.41■■□□□ 1.02
CLDN12P56749 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.41■■□□□ 1.02
CLDN12P56749 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLDN12P56749 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CLDN12P56749 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLDN12P56749 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CLDN12P56749 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms