Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 YOL046CYOL046C 675 nt8.85□□□□□ -0.99
RTR1P40084 PLB3YOL011W 2061 nt8.85□□□□□ -0.99
RTR1P40084 SUN4YNL066W 1263 nt8.84□□□□□ -0.99
RTR1P40084 CTA1YDR256C 1548 nt8.84□□□□□ -0.99
RTR1P40084 THR1YHR025W 1074 nt8.83□□□□□ -1
RTR1P40084 NTG2YOL043C 1143 nt8.83□□□□□ -1
RTR1P40084 TOK1YJL093C 2076 nt8.83□□□□□ -1
RTR1P40084 MHP1YJL042W 4197 nt8.82□□□□□ -1
RTR1P40084 SEC24YIL109C 2781 nt8.82□□□□□ -1
RTR1P40084 HPT1YDR399W 666 nt8.82□□□□□ -1
RTR1P40084 YAL045CYAL045C 309 nt8.82□□□□□ -1
RTR1P40084 ENB1YOL158C 1821 nt8.82□□□□□ -1
RTR1P40084 YOL099CYOL099C 492 nt8.81□□□□□ -1
RTR1P40084 CHA1YCL064C 1083 nt8.8□□□□□ -1
RTR1P40084 FIT2YOR382W 462 nt8.8□□□□□ -1
RTR1P40084 NPP1YCR026C 2229 nt8.79□□□□□ -1
RTR1P40084 PRB1YEL060C 1908 nt8.79□□□□□ -1
RTR1P40084 YLL058WYLL058W 1728 nt8.78□□□□□ -1
RTR1P40084 LOT6YLR011W 576 nt8.78□□□□□ -1
RTR1P40084 YPR127WYPR127W 1038 nt8.78□□□□□ -1
RTR1P40084 YIP4YGL198W 708 nt8.77□□□□□ -1.01
RTR1P40084 YPR076WYPR076W 375 nt8.77□□□□□ -1.01
RTR1P40084 AGX1YFL030W 1158 nt8.75□□□□□ -1.01
RTR1P40084 IRC5YFR038W 2562 nt8.74□□□□□ -1.01
RTR1P40084 DTR1YBR180W 1719 nt8.74□□□□□ -1.01
RTR1P40084 TOD6YBL054W 1578 nt8.74□□□□□ -1.01
RTR1P40084 YOR111WYOR111W 699 nt8.74□□□□□ -1.01
RTR1P40084 COX15YER141W 1461 nt8.74□□□□□ -1.01
RTR1P40084 LPD1YFL018C 1500 nt8.73□□□□□ -1.01
RTR1P40084 CYS4YGR155W 1524 nt8.73□□□□□ -1.01
RTR1P40084 DLD1YDL174C 1764 nt8.73□□□□□ -1.01
RTR1P40084 MSG5YNL053W 1470 nt8.72□□□□□ -1.01
RTR1P40084 REC107YJR021C 945 nt8.72□□□□□ -1.01
RTR1P40084 ILV2YMR108W 2064 nt8.72□□□□□ -1.01
RTR1P40084 PPH21YDL134C 1110 nt8.71□□□□□ -1.02
RTR1P40084 HOC1YJR075W 1191 nt8.71□□□□□ -1.02
RTR1P40084 SSC1YJR045C 1965 nt8.7□□□□□ -1.02
RTR1P40084 TDP1YBR223C 1635 nt8.7□□□□□ -1.02
RTR1P40084 MIX17YMR002W 471 nt8.7□□□□□ -1.02
RTR1P40084 NUP49YGL172W 1419 nt8.7□□□□□ -1.02
RTR1P40084 ICP55YER078C 1536 nt8.7□□□□□ -1.02
RTR1P40084 HEM14YER014W 1620 nt8.69□□□□□ -1.02
RTR1P40084 YER137CYER137C 447 nt8.69□□□□□ -1.02
RTR1P40084 YGL102CYGL102C 429 nt8.69□□□□□ -1.02
RTR1P40084 LIA1YJR070C 978 nt8.69□□□□□ -1.02
RTR1P40084 ASR1YPR093C 867 nt8.69□□□□□ -1.02
RTR1P40084 FCY22YER060W-A 1593 nt8.69□□□□□ -1.02
RTR1P40084 RFC1YOR217W 2586 nt8.68□□□□□ -1.02
RTR1P40084 NUP84YDL116W 2181 nt8.68□□□□□ -1.02
RTR1P40084 SPG5YMR191W 1122 nt8.68□□□□□ -1.02
RTR1P40084 YNL190WYNL190W 615 nt8.68□□□□□ -1.02
RTR1P40084 ERR1YOR393W 1314 nt8.68□□□□□ -1.02
RTR1P40084 ERR2YPL281C 1314 nt8.68□□□□□ -1.02
RTR1P40084 MSC3YLR219W 2187 nt8.68□□□□□ -1.02
RTR1P40084 PRI1YIR008C 1230 nt8.67□□□□□ -1.02
RTR1P40084 VBA5YKR105C 1749 nt8.67□□□□□ -1.02
RTR1P40084 FMP40YPL222W 2067 nt8.66□□□□□ -1.02
RTR1P40084 YCR041WYCR041W 333 nt8.66□□□□□ -1.02
RTR1P40084 ATP10YLR393W 840 nt8.66□□□□□ -1.02
RTR1P40084 YMR253CYMR253C 1245 nt8.66□□□□□ -1.02
RTR1P40084 FCP1YMR277W 2199 nt8.65□□□□□ -1.02
RTR1P40084 MRPS28YDR337W 861 nt8.65□□□□□ -1.02
RTR1P40084 SNF4YGL115W 969 nt8.65□□□□□ -1.02
RTR1P40084 YLL056CYLL056C 897 nt8.65□□□□□ -1.02
RTR1P40084 RPL31BYLR406C 342 nt8.65□□□□□ -1.02
RTR1P40084 SMX3YPR182W 261 nt8.65□□□□□ -1.02
RTR1P40084 CRH1YGR189C 1524 nt8.64□□□□□ -1.03
RTR1P40084 MET30YIL046W 1923 nt8.64□□□□□ -1.03
RTR1P40084 GPD1YDL022W 1176 nt8.64□□□□□ -1.03
RTR1P40084 PTC7YHR076W 1032 nt8.64□□□□□ -1.03
RTR1P40084 RPL2BYIL018W 765 nt8.63□□□□□ -1.03
RTR1P40084 YLR112WYLR112W 420 nt8.63□□□□□ -1.03
RTR1P40084 MRPL35YDR322W 1104 nt8.62□□□□□ -1.03
RTR1P40084 CEM1YER061C 1329 nt8.61□□□□□ -1.03
RTR1P40084 LAS17YOR181W 1902 nt8.61□□□□□ -1.03
RTR1P40084 MRPL19YNL185C 477 nt8.6□□□□□ -1.03
RTR1P40084 YOR012WYOR012W 414 nt8.6□□□□□ -1.03
RTR1P40084 SEC62YPL094C 825 nt8.6□□□□□ -1.03
RTR1P40084 SNT309YPR101W 528 nt8.6□□□□□ -1.03
RTR1P40084 POB3YML069W 1659 nt8.59□□□□□ -1.03
RTR1P40084 LSC1YOR142W 990 nt8.59□□□□□ -1.03
RTR1P40084 LCL3YGL085W 825 nt8.58□□□□□ -1.04
RTR1P40084 CBR1YIL043C 855 nt8.58□□□□□ -1.04
RTR1P40084 SRY1YKL218C 981 nt8.58□□□□□ -1.04
RTR1P40084 BNA3YJL060W 1335 nt8.57□□□□□ -1.04
RTR1P40084 AMN1YBR158W 1650 nt8.57□□□□□ -1.04
RTR1P40084 TRS31YDR472W 852 nt8.57□□□□□ -1.04
RTR1P40084 YBR113WYBR113W 483 nt8.57□□□□□ -1.04
RTR1P40084 TUF1YOR187W 1314 nt8.56□□□□□ -1.04
RTR1P40084 MCM5YLR274W 2328 nt8.56□□□□□ -1.04
RTR1P40084 URH1YDR400W 1023 nt8.56□□□□□ -1.04
RTR1P40084 MRPL28YDR462W 444 nt8.55□□□□□ -1.04
RTR1P40084 AIM2YAL049C 741 nt8.55□□□□□ -1.04
RTR1P40084 ASF1YJL115W 840 nt8.54□□□□□ -1.04
RTR1P40084 HED1YDR014W-A 489 nt8.53□□□□□ -1.04
RTR1P40084 YKL077WYKL077W 1179 nt8.53□□□□□ -1.04
RTR1P40084 RFS1YBR052C 633 nt8.53□□□□□ -1.04
RTR1P40084 DOT1YDR440W 1749 nt8.53□□□□□ -1.04
RTR1P40084 AQR1YNL065W 1761 nt8.53□□□□□ -1.04
RTR1P40084 PAC2YER007W 1557 nt8.52□□□□□ -1.04
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms