Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.55■■□□□ 1.04
GDNFP39905 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.55■■□□□ 1.04
GDNFP39905 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GDNFP39905 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.55■■□□□ 1.04
GDNFP39905 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GDNFP39905 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GDNFP39905 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GDNFP39905 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
GDNFP39905 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.54■■□□□ 1.04
GDNFP39905 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
GDNFP39905 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GDNFP39905 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GDNFP39905 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
GDNFP39905 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
GDNFP39905 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.53■■□□□ 1.04
GDNFP39905 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
GDNFP39905 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GDNFP39905 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GDNFP39905 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
GDNFP39905 AP002414.2-202ENST00000590929 1450 ntBASIC21.52■■□□□ 1.04
GDNFP39905 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.52■■□□□ 1.04
GDNFP39905 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
GDNFP39905 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
GDNFP39905 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
GDNFP39905 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.51■■□□□ 1.03
GDNFP39905 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
GDNFP39905 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
GDNFP39905 AL162393.1-201ENST00000437852 946 ntBASIC21.5■■□□□ 1.03
GDNFP39905 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.5■■□□□ 1.03
GDNFP39905 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
GDNFP39905 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GDNFP39905 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GDNFP39905 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GDNFP39905 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GDNFP39905 AP006261.1-201ENST00000584783 668 ntBASIC21.49■■□□□ 1.03
GDNFP39905 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GDNFP39905 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.49■■□□□ 1.03
GDNFP39905 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.49■■□□□ 1.03
GDNFP39905 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
GDNFP39905 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.48■■□□□ 1.03
GDNFP39905 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.48■■□□□ 1.03
GDNFP39905 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
GDNFP39905 MIR3665-201ENST00000578708 105 ntBASIC21.48■■□□□ 1.03
GDNFP39905 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.48■■□□□ 1.03
GDNFP39905 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
GDNFP39905 DUSP8P4-201ENST00000399538 1761 ntBASIC21.48■■□□□ 1.03
GDNFP39905 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GDNFP39905 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.47■■□□□ 1.03
GDNFP39905 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GDNFP39905 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
GDNFP39905 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
GDNFP39905 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
GDNFP39905 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.46■■□□□ 1.03
GDNFP39905 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.46■■□□□ 1.03
GDNFP39905 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GDNFP39905 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
GDNFP39905 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.45■■□□□ 1.02
GDNFP39905 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.45■■□□□ 1.02
GDNFP39905 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GDNFP39905 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GDNFP39905 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GDNFP39905 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GDNFP39905 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GDNFP39905 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GDNFP39905 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
GDNFP39905 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
GDNFP39905 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GDNFP39905 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.43■■□□□ 1.02
GDNFP39905 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.43■■□□□ 1.02
GDNFP39905 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
GDNFP39905 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GDNFP39905 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
GDNFP39905 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GDNFP39905 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GDNFP39905 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
GDNFP39905 AC092803.2-201ENST00000564287 1899 ntBASIC21.42■■□□□ 1.02
GDNFP39905 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
GDNFP39905 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
GDNFP39905 AC087741.3-201ENST00000624270 1347 ntBASIC21.42■■□□□ 1.02
GDNFP39905 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
GDNFP39905 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
GDNFP39905 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
GDNFP39905 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.41■■□□□ 1.02
GDNFP39905 MIR6090-201ENST00000622481 60 ntBASIC21.41■■□□□ 1.02
GDNFP39905 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
GDNFP39905 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
GDNFP39905 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GDNFP39905 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GDNFP39905 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
GDNFP39905 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
GDNFP39905 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
GDNFP39905 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
GDNFP39905 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.39■■□□□ 1.02
GDNFP39905 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GDNFP39905 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.39■■□□□ 1.01
GDNFP39905 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
GDNFP39905 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
GDNFP39905 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GDNFP39905 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GDNFP39905 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms