Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 YOR012WYOR012W 414 nt7.06□□□□□ -1.28
TDP1P38319 ADA2YDR448W 1305 nt7.05□□□□□ -1.28
TDP1P38319 PPS1YBR276C 2424 nt7.05□□□□□ -1.28
TDP1P38319 UTP6YDR449C 1323 nt7.04□□□□□ -1.28
TDP1P38319 SPR1YOR190W 1338 nt7.04□□□□□ -1.28
TDP1P38319 TDH1YJL052W 999 nt7.04□□□□□ -1.28
TDP1P38319 YPL071CYPL071C 471 nt7.04□□□□□ -1.28
TDP1P38319 PSP2YML017W 1782 nt7.04□□□□□ -1.28
TDP1P38319 RDR1YOR380W 1641 nt7.04□□□□□ -1.28
TDP1P38319 TOS2YGR221C 1869 nt7.03□□□□□ -1.28
TDP1P38319 UBP13YBL067C 2244 nt7.03□□□□□ -1.28
TDP1P38319 YCR041WYCR041W 333 nt7.03□□□□□ -1.28
TDP1P38319 PSA1YDL055C 1086 nt7.03□□□□□ -1.28
TDP1P38319 MRP1YDR347W 966 nt7.03□□□□□ -1.28
TDP1P38319 SNF4YGL115W 969 nt7.03□□□□□ -1.28
TDP1P38319 SGV1YPR161C 1974 nt7.02□□□□□ -1.29
TDP1P38319 TRR1YDR353W 960 nt7.02□□□□□ -1.29
TDP1P38319 YGR068W-AYGR068W-A 96 nt7.02□□□□□ -1.29
TDP1P38319 KAE1YKR038C 1161 nt7.02□□□□□ -1.29
TDP1P38319 ATG17YLR423C 1254 nt7.02□□□□□ -1.29
TDP1P38319 YPT10YBR264C 600 nt7.02□□□□□ -1.29
TDP1P38319 PNS1YOR161C 1620 nt7.01□□□□□ -1.29
TDP1P38319 VTS1YOR359W 1572 nt7.01□□□□□ -1.29
TDP1P38319 tL(UAA)B1tL(UAA)B1 84 nt7.01□□□□□ -1.29
TDP1P38319 tL(UAA)B2tL(UAA)B2 84 nt7.01□□□□□ -1.29
TDP1P38319 tL(UAA)DtL(UAA)D 84 nt7.01□□□□□ -1.29
TDP1P38319 SUP51tL(UAA)J 84 nt7.01□□□□□ -1.29
TDP1P38319 tL(UAA)KtL(UAA)K 84 nt7.01□□□□□ -1.29
TDP1P38319 tL(UAA)LtL(UAA)L 84 nt7.01□□□□□ -1.29
TDP1P38319 tL(UAA)NtL(UAA)N 84 nt7.01□□□□□ -1.29
TDP1P38319 PAC10YGR078C 600 nt7.01□□□□□ -1.29
TDP1P38319 YLR112WYLR112W 420 nt7.01□□□□□ -1.29
TDP1P38319 YOR389WYOR389W 1875 nt7□□□□□ -1.29
TDP1P38319 CDC3YLR314C 1563 nt7□□□□□ -1.29
TDP1P38319 HHY1YEL059W 309 nt7□□□□□ -1.29
TDP1P38319 BNS1YGR230W 414 nt7□□□□□ -1.29
TDP1P38319 CPT1YNL130C 1182 nt7□□□□□ -1.29
TDP1P38319 DSC3YOR223W 879 nt7□□□□□ -1.29
TDP1P38319 ERV2YPR037C 591 nt7□□□□□ -1.29
TDP1P38319 HSM3YBR272C 1443 nt7□□□□□ -1.29
TDP1P38319 SEC23YPR181C 2307 nt6.99□□□□□ -1.29
TDP1P38319 GDH1YOR375C 1365 nt6.99□□□□□ -1.29
TDP1P38319 ELP4YPL101W 1371 nt6.99□□□□□ -1.29
TDP1P38319 SSC1YJR045C 1965 nt6.99□□□□□ -1.29
TDP1P38319 YOR268CYOR268C 399 nt6.99□□□□□ -1.29
TDP1P38319 SRF1YDL133W 1314 nt6.99□□□□□ -1.29
TDP1P38319 CDC7YDL017W 1524 nt6.98□□□□□ -1.29
TDP1P38319 AGP2YBR132C 1791 nt6.97□□□□□ -1.29
TDP1P38319 HAC1YFL031W 717 nt6.97□□□□□ -1.29
TDP1P38319 AIM2YAL049C 741 nt6.97□□□□□ -1.29
TDP1P38319 YMR074CYMR074C 438 nt6.97□□□□□ -1.29
TDP1P38319 EFM1YHL039W 1758 nt6.97□□□□□ -1.29
TDP1P38319 PGI1YBR196C 1665 nt6.96□□□□□ -1.29
TDP1P38319 SEM1YDR363W-A 270 nt6.96□□□□□ -1.3
TDP1P38319 SUN4YNL066W 1263 nt6.96□□□□□ -1.3
TDP1P38319 PHO85YPL031C 918 nt6.96□□□□□ -1.3
TDP1P38319 MHP1YJL042W 4197 nt6.96□□□□□ -1.3
TDP1P38319 SKP1YDR328C 585 nt6.95□□□□□ -1.3
TDP1P38319 TAD2YJL035C 753 nt6.95□□□□□ -1.3
TDP1P38319 KIN1YDR122W 3195 nt6.94□□□□□ -1.3
TDP1P38319 YOR300WYOR300W 309 nt6.94□□□□□ -1.3
TDP1P38319 CRN1YLR429W 1956 nt6.93□□□□□ -1.3
TDP1P38319 EDC2YER035W 438 nt6.93□□□□□ -1.3
TDP1P38319 STS1YIR011C 960 nt6.93□□□□□ -1.3
TDP1P38319 TOS1YBR162C 1368 nt6.93□□□□□ -1.3
TDP1P38319 GPH1YPR160W 2709 nt6.92□□□□□ -1.3
TDP1P38319 SUF3tG(CCC)D 72 nt6.92□□□□□ -1.3
TDP1P38319 ERG27YLR100W 1044 nt6.92□□□□□ -1.3
TDP1P38319 HRB1YNL004W 1365 nt6.92□□□□□ -1.3
TDP1P38319 PRP2YNR011C 2631 nt6.92□□□□□ -1.3
TDP1P38319 NUP53YMR153W 1428 nt6.92□□□□□ -1.3
TDP1P38319 YJR142WYJR142W 1029 nt6.91□□□□□ -1.3
TDP1P38319 CCW12YLR110C 402 nt6.91□□□□□ -1.3
TDP1P38319 MFG1YDL233W 1377 nt6.91□□□□□ -1.3
TDP1P38319 YHC3YJL059W 1227 nt6.9□□□□□ -1.3
TDP1P38319 OSM1YJR051W 1506 nt6.9□□□□□ -1.31
TDP1P38319 SNU71YGR013W 1863 nt6.9□□□□□ -1.31
TDP1P38319 Q0144Q0144 330 nt6.89□□□□□ -1.31
TDP1P38319 YJL213WYJL213W 996 nt6.89□□□□□ -1.31
TDP1P38319 ADE1YAR015W 921 nt6.89□□□□□ -1.31
TDP1P38319 MCH2YKL221W 1422 nt6.89□□□□□ -1.31
TDP1P38319 CIT3YPR001W 1461 nt6.89□□□□□ -1.31
TDP1P38319 TDP1YBR223C 1635 nt6.89□□□□□ -1.31
TDP1P38319 ADE17YMR120C 1779 nt6.89□□□□□ -1.31
TDP1P38319 NMD5YJR132W 3147 nt6.89□□□□□ -1.31
TDP1P38319 ECM30YLR436C 3825 nt6.89□□□□□ -1.31
TDP1P38319 SNT309YPR101W 528 nt6.88□□□□□ -1.31
TDP1P38319 YPR127WYPR127W 1038 nt6.88□□□□□ -1.31
TDP1P38319 RQC1YDR333C 2172 nt6.88□□□□□ -1.31
TDP1P38319 ERG12YMR208W 1332 nt6.87□□□□□ -1.31
TDP1P38319 YDR509WYDR509W 348 nt6.87□□□□□ -1.31
TDP1P38319 NMA2YGR010W 1188 nt6.87□□□□□ -1.31
TDP1P38319 GSH1YJL101C 2037 nt6.86□□□□□ -1.31
TDP1P38319 PIL1YGR086C 1020 nt6.86□□□□□ -1.31
TDP1P38319 NTG1YAL015C 1200 nt6.86□□□□□ -1.31
TDP1P38319 NCA3YJL116C 1014 nt6.86□□□□□ -1.31
TDP1P38319 SKG1YKR100C 1068 nt6.86□□□□□ -1.31
TDP1P38319 CYB2YML054C 1776 nt6.86□□□□□ -1.31
TDP1P38319 AMN1YBR158W 1650 nt6.86□□□□□ -1.31
TDP1P38319 DMC1YER179W 1005 nt6.85□□□□□ -1.31
Retrieved 100 of 7,029 protein–RNA pairs in 14.3 ms