Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.75■■□□□ 1.07
UBCP0CG48 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.75■■□□□ 1.07
UBCP0CG48 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
UBCP0CG48 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
UBCP0CG48 AC087741.3-201ENST00000624270 1347 ntBASIC21.74■■□□□ 1.07
UBCP0CG48 AC091060.1-201ENST00000623524 1766 ntBASIC21.74■■□□□ 1.07
UBCP0CG48 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.73■■□□□ 1.07
UBCP0CG48 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
UBCP0CG48 AL449106.1-201ENST00000608517 1980 ntBASIC21.73■■□□□ 1.07
UBCP0CG48 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
UBCP0CG48 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.73■■□□□ 1.07
UBCP0CG48 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
UBCP0CG48 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.73■■□□□ 1.07
UBCP0CG48 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.72■■□□□ 1.07
UBCP0CG48 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBCP0CG48 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.72■■□□□ 1.07
UBCP0CG48 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBCP0CG48 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBCP0CG48 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.71■■□□□ 1.07
UBCP0CG48 AC044849.2-201ENST00000606596 710 ntBASIC21.71■■□□□ 1.07
UBCP0CG48 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBCP0CG48 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBCP0CG48 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
UBCP0CG48 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
UBCP0CG48 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
UBCP0CG48 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
UBCP0CG48 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.69■■□□□ 1.06
UBCP0CG48 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
UBCP0CG48 AC110285.7-201ENST00000624417 1536 ntBASIC21.69■■□□□ 1.06
UBCP0CG48 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBCP0CG48 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
UBCP0CG48 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBCP0CG48 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBCP0CG48 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.68■■□□□ 1.06
UBCP0CG48 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBCP0CG48 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBCP0CG48 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.68■■□□□ 1.06
UBCP0CG48 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
UBCP0CG48 AC145676.1-201ENST00000514988 2004 ntBASIC21.67■■□□□ 1.06
UBCP0CG48 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBCP0CG48 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.67■■□□□ 1.06
UBCP0CG48 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
UBCP0CG48 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBCP0CG48 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.67■■□□□ 1.06
UBCP0CG48 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBCP0CG48 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBCP0CG48 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBCP0CG48 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
UBCP0CG48 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.66■■□□□ 1.06
UBCP0CG48 AL162393.1-201ENST00000437852 946 ntBASIC21.66■■□□□ 1.06
UBCP0CG48 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.66■■□□□ 1.06
UBCP0CG48 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
UBCP0CG48 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.65■■□□□ 1.06
UBCP0CG48 AP004609.3-201ENST00000610705 1884 ntBASIC21.65■■□□□ 1.06
UBCP0CG48 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBCP0CG48 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
UBCP0CG48 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
UBCP0CG48 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
UBCP0CG48 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
UBCP0CG48 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.64■■□□□ 1.05
UBCP0CG48 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBCP0CG48 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
UBCP0CG48 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.64■■□□□ 1.05
UBCP0CG48 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.63■■□□□ 1.05
UBCP0CG48 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
UBCP0CG48 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBCP0CG48 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.62■■□□□ 1.05
UBCP0CG48 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBCP0CG48 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBCP0CG48 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
UBCP0CG48 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBCP0CG48 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
UBCP0CG48 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBCP0CG48 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
UBCP0CG48 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.61■■□□□ 1.05
UBCP0CG48 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.61■■□□□ 1.05
UBCP0CG48 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.6■■□□□ 1.05
UBCP0CG48 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBCP0CG48 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.6■■□□□ 1.05
UBCP0CG48 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.59■■□□□ 1.05
UBCP0CG48 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBCP0CG48 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
UBCP0CG48 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBCP0CG48 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBCP0CG48 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
UBCP0CG48 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBCP0CG48 AC092803.2-201ENST00000564287 1899 ntBASIC21.57■■□□□ 1.04
UBCP0CG48 WHAMMP3-201ENST00000611636 1609 ntBASIC21.57■■□□□ 1.04
UBCP0CG48 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBCP0CG48 AC142472.1-201ENST00000612013 1741 ntBASIC21.57■■□□□ 1.04
UBCP0CG48 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
UBCP0CG48 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBCP0CG48 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UBCP0CG48 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.56■■□□□ 1.04
UBCP0CG48 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.56■■□□□ 1.04
UBCP0CG48 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
UBCP0CG48 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.56■■□□□ 1.04
UBCP0CG48 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
UBCP0CG48 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
UBCP0CG48 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms