Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD74P04233 AC135983.2-203ENST00000454486 1613 ntBASIC20.97■□□□□ 0.95
CD74P04233 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD74P04233 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.97■□□□□ 0.95
CD74P04233 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CD74P04233 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD74P04233 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD74P04233 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CD74P04233 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD74P04233 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.95■□□□□ 0.94
CD74P04233 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.95■□□□□ 0.94
CD74P04233 AP004609.3-201ENST00000610705 1884 ntBASIC20.95■□□□□ 0.94
CD74P04233 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD74P04233 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CD74P04233 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CD74P04233 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD74P04233 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD74P04233 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CD74P04233 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.94■□□□□ 0.94
CD74P04233 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD74P04233 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD74P04233 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD74P04233 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CD74P04233 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD74P04233 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CD74P04233 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CD74P04233 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CD74P04233 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CD74P04233 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.93■□□□□ 0.94
CD74P04233 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD74P04233 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD74P04233 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD74P04233 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.91■□□□□ 0.94
CD74P04233 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD74P04233 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.91■□□□□ 0.94
CD74P04233 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD74P04233 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CD74P04233 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD74P04233 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD74P04233 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.9■□□□□ 0.94
CD74P04233 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD74P04233 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CD74P04233 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.89■□□□□ 0.93
CD74P04233 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CD74P04233 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CD74P04233 SETD8P1-201ENST00000623146 1180 ntBASIC20.88■□□□□ 0.93
CD74P04233 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
CD74P04233 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.88■□□□□ 0.93
CD74P04233 WHAMMP2-203ENST00000563942 1603 ntBASIC20.88■□□□□ 0.93
CD74P04233 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CD74P04233 AL391121.1-201ENST00000607967 1349 ntBASIC20.87■□□□□ 0.93
CD74P04233 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CD74P04233 ERN1-208ENST00000606895 2068 ntBASIC20.87■□□□□ 0.93
CD74P04233 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CD74P04233 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CD74P04233 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.86■□□□□ 0.93
CD74P04233 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.86■□□□□ 0.93
CD74P04233 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.85■□□□□ 0.93
CD74P04233 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD74P04233 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.85■□□□□ 0.93
CD74P04233 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD74P04233 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CD74P04233 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD74P04233 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.85■□□□□ 0.93
CD74P04233 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.85■□□□□ 0.93
CD74P04233 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD74P04233 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD74P04233 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD74P04233 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CD74P04233 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.84■□□□□ 0.93
CD74P04233 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD74P04233 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD74P04233 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CD74P04233 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CD74P04233 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CD74P04233 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CD74P04233 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD74P04233 RARRES2P7-201ENST00000567349 469 ntBASIC20.82■□□□□ 0.92
CD74P04233 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD74P04233 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD74P04233 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD74P04233 AC142472.1-201ENST00000612013 1741 ntBASIC20.81■□□□□ 0.92
CD74P04233 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD74P04233 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.81■□□□□ 0.92
CD74P04233 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD74P04233 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.81■□□□□ 0.92
CD74P04233 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.8■□□□□ 0.92
CD74P04233 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.8■□□□□ 0.92
CD74P04233 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD74P04233 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD74P04233 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.8■□□□□ 0.92
CD74P04233 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD74P04233 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD74P04233 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.79■□□□□ 0.92
CD74P04233 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD74P04233 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CD74P04233 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD74P04233 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD74P04233 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD74P04233 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms