Protein–RNA interactions for Protein: P04155

TFF1, Trefoil factor 1, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1P04155 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
TFF1P04155 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TFF1P04155 AL121749.1-202ENST00000609313 2153 ntBASIC20.97■□□□□ 0.95
TFF1P04155 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TFF1P04155 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TFF1P04155 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TFF1P04155 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TFF1P04155 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TFF1P04155 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.96■□□□□ 0.95
TFF1P04155 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TFF1P04155 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TFF1P04155 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TFF1P04155 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TFF1P04155 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
TFF1P04155 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
TFF1P04155 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.95■□□□□ 0.94
TFF1P04155 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.95■□□□□ 0.94
TFF1P04155 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TFF1P04155 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TFF1P04155 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.95■□□□□ 0.94
TFF1P04155 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TFF1P04155 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TFF1P04155 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TFF1P04155 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.94■□□□□ 0.94
TFF1P04155 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TFF1P04155 MIR219A2-201ENST00000608502 1504 ntBASIC20.94■□□□□ 0.94
TFF1P04155 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.93■□□□□ 0.94
TFF1P04155 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.93■□□□□ 0.94
TFF1P04155 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.92■□□□□ 0.94
TFF1P04155 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TFF1P04155 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TFF1P04155 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.92■□□□□ 0.94
TFF1P04155 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TFF1P04155 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.92■□□□□ 0.94
TFF1P04155 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
TFF1P04155 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TFF1P04155 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.91■□□□□ 0.94
TFF1P04155 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
TFF1P04155 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TFF1P04155 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TFF1P04155 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TFF1P04155 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TFF1P04155 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.9■□□□□ 0.94
TFF1P04155 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TFF1P04155 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TFF1P04155 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TFF1P04155 AC008813.1-201ENST00000536597 885 ntBASIC20.9■□□□□ 0.94
TFF1P04155 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.9■□□□□ 0.94
TFF1P04155 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
TFF1P04155 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TFF1P04155 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.89■□□□□ 0.94
TFF1P04155 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TFF1P04155 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TFF1P04155 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TFF1P04155 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.89■□□□□ 0.93
TFF1P04155 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.93
TFF1P04155 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
TFF1P04155 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
TFF1P04155 MIR639-201ENST00000384974 98 ntBASIC20.88■□□□□ 0.93
TFF1P04155 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TFF1P04155 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TFF1P04155 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TFF1P04155 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TFF1P04155 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TFF1P04155 AL449106.1-201ENST00000608517 1980 ntBASIC20.87■□□□□ 0.93
TFF1P04155 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.87■□□□□ 0.93
TFF1P04155 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TFF1P04155 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TFF1P04155 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TFF1P04155 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
TFF1P04155 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TFF1P04155 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TFF1P04155 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TFF1P04155 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TFF1P04155 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.85■□□□□ 0.93
TFF1P04155 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TFF1P04155 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TFF1P04155 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TFF1P04155 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.85■□□□□ 0.93
TFF1P04155 AC148477.6-201ENST00000623746 465 ntBASIC20.85■□□□□ 0.93
TFF1P04155 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.85■□□□□ 0.93
TFF1P04155 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
TFF1P04155 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
TFF1P04155 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
TFF1P04155 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
TFF1P04155 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TFF1P04155 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TFF1P04155 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
TFF1P04155 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
TFF1P04155 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TFF1P04155 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
TFF1P04155 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TFF1P04155 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TFF1P04155 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.82■□□□□ 0.92
TFF1P04155 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TFF1P04155 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.82■□□□□ 0.92
TFF1P04155 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TFF1P04155 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.81■□□□□ 0.92
TFF1P04155 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TFF1P04155 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms