Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.14■□□□□ 0.81
SCAF4O95104 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.14■□□□□ 0.81
SCAF4O95104 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SCAF4O95104 AC100797.4-201ENST00000631653 1827 ntBASIC20.13■□□□□ 0.81
SCAF4O95104 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SCAF4O95104 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SCAF4O95104 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.13■□□□□ 0.81
SCAF4O95104 AC005559.1-201ENST00000589661 871 ntBASIC20.13■□□□□ 0.81
SCAF4O95104 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SCAF4O95104 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.13■□□□□ 0.81
SCAF4O95104 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SCAF4O95104 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.12■□□□□ 0.81
SCAF4O95104 AP006261.1-201ENST00000584783 668 ntBASIC20.12■□□□□ 0.81
SCAF4O95104 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SCAF4O95104 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCAF4O95104 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCAF4O95104 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCAF4O95104 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SCAF4O95104 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.11■□□□□ 0.81
SCAF4O95104 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCAF4O95104 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCAF4O95104 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SCAF4O95104 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.11■□□□□ 0.81
SCAF4O95104 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SCAF4O95104 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCAF4O95104 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SCAF4O95104 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCAF4O95104 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCAF4O95104 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.1■□□□□ 0.81
SCAF4O95104 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCAF4O95104 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SCAF4O95104 AL162393.1-201ENST00000437852 946 ntBASIC20.1■□□□□ 0.81
SCAF4O95104 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.1■□□□□ 0.81
SCAF4O95104 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SCAF4O95104 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SCAF4O95104 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SCAF4O95104 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.09■□□□□ 0.81
SCAF4O95104 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SCAF4O95104 MIR3665-201ENST00000578708 105 ntBASIC20.09■□□□□ 0.81
SCAF4O95104 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SCAF4O95104 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
SCAF4O95104 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SCAF4O95104 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
SCAF4O95104 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SCAF4O95104 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SCAF4O95104 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.08■□□□□ 0.81
SCAF4O95104 RPS2P35-201ENST00000443417 897 ntBASIC20.08■□□□□ 0.81
SCAF4O95104 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.08■□□□□ 0.81
SCAF4O95104 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
SCAF4O95104 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SCAF4O95104 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.07■□□□□ 0.8
SCAF4O95104 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SCAF4O95104 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.07■□□□□ 0.8
SCAF4O95104 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SCAF4O95104 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SCAF4O95104 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
SCAF4O95104 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SCAF4O95104 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SCAF4O95104 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SCAF4O95104 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
SCAF4O95104 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCAF4O95104 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.06■□□□□ 0.8
SCAF4O95104 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCAF4O95104 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.06■□□□□ 0.8
SCAF4O95104 DUX4L28-201ENST00000623687 678 ntBASIC20.06■□□□□ 0.8
SCAF4O95104 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.05■□□□□ 0.8
SCAF4O95104 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCAF4O95104 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCAF4O95104 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCAF4O95104 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCAF4O95104 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SCAF4O95104 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCAF4O95104 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.04■□□□□ 0.8
SCAF4O95104 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCAF4O95104 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCAF4O95104 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCAF4O95104 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.04■□□□□ 0.8
SCAF4O95104 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCAF4O95104 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCAF4O95104 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
SCAF4O95104 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.04■□□□□ 0.8
SCAF4O95104 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCAF4O95104 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCAF4O95104 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCAF4O95104 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCAF4O95104 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SCAF4O95104 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCAF4O95104 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SCAF4O95104 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.03■□□□□ 0.8
SCAF4O95104 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCAF4O95104 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.03■□□□□ 0.8
SCAF4O95104 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCAF4O95104 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCAF4O95104 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SCAF4O95104 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.02■□□□□ 0.8
SCAF4O95104 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SCAF4O95104 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.01■□□□□ 0.79
SCAF4O95104 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.01■□□□□ 0.79
SCAF4O95104 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SCAF4O95104 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms