Protein–RNA interactions for Protein: O60906

SMPD2, Sphingomyelin phosphodiesterase 2, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2O60906 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
SMPD2O60906 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMPD2O60906 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
SMPD2O60906 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
SMPD2O60906 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
SMPD2O60906 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMPD2O60906 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMPD2O60906 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
SMPD2O60906 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMPD2O60906 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.84■■□□□ 1.09
SMPD2O60906 AC142086.6-201ENST00000621154 1765 ntBASIC21.84■■□□□ 1.09
SMPD2O60906 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMPD2O60906 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SMPD2O60906 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMPD2O60906 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMPD2O60906 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMPD2O60906 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
SMPD2O60906 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMPD2O60906 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.82■■□□□ 1.08
SMPD2O60906 AL033527.3-201ENST00000566366 1196 ntBASIC21.82■■□□□ 1.08
SMPD2O60906 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMPD2O60906 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMPD2O60906 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.81■■□□□ 1.08
SMPD2O60906 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMPD2O60906 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.8■■□□□ 1.08
SMPD2O60906 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.8■■□□□ 1.08
SMPD2O60906 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.8■■□□□ 1.08
SMPD2O60906 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
SMPD2O60906 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.79■■□□□ 1.08
SMPD2O60906 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SMPD2O60906 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMPD2O60906 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
SMPD2O60906 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.79■■□□□ 1.08
SMPD2O60906 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SMPD2O60906 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMPD2O60906 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.78■■□□□ 1.08
SMPD2O60906 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
SMPD2O60906 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
SMPD2O60906 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
SMPD2O60906 AC018358.1-201ENST00000631079 1402 ntBASIC21.77■■□□□ 1.08
SMPD2O60906 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.76■■□□□ 1.07
SMPD2O60906 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SMPD2O60906 AC060814.1-201ENST00000554326 538 ntBASIC21.76■■□□□ 1.07
SMPD2O60906 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.76■■□□□ 1.07
SMPD2O60906 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SMPD2O60906 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SMPD2O60906 U85056.1-201ENST00000616429 682 ntBASIC21.75■■□□□ 1.07
SMPD2O60906 AC148477.6-201ENST00000623746 465 ntBASIC21.75■■□□□ 1.07
SMPD2O60906 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SMPD2O60906 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
SMPD2O60906 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMPD2O60906 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMPD2O60906 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMPD2O60906 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.74■■□□□ 1.07
SMPD2O60906 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMPD2O60906 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SMPD2O60906 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SMPD2O60906 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SMPD2O60906 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMPD2O60906 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SMPD2O60906 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
SMPD2O60906 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.72■■□□□ 1.07
SMPD2O60906 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SMPD2O60906 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMPD2O60906 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.71■■□□□ 1.07
SMPD2O60906 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.71■■□□□ 1.07
SMPD2O60906 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMPD2O60906 LINC01003-201ENST00000564834 1764 ntBASIC21.7■■□□□ 1.06
SMPD2O60906 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SMPD2O60906 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SMPD2O60906 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMPD2O60906 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SMPD2O60906 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.69■■□□□ 1.06
SMPD2O60906 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMPD2O60906 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.69■■□□□ 1.06
SMPD2O60906 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SMPD2O60906 TSPY13P-201ENST00000338964 914 ntBASIC21.68■■□□□ 1.06
SMPD2O60906 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.68■■□□□ 1.06
SMPD2O60906 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
SMPD2O60906 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
SMPD2O60906 BX255925.1-201ENST00000566954 1854 ntBASIC21.68■■□□□ 1.06
SMPD2O60906 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMPD2O60906 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMPD2O60906 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMPD2O60906 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
SMPD2O60906 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMPD2O60906 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMPD2O60906 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMPD2O60906 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SMPD2O60906 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.66■■□□□ 1.06
SMPD2O60906 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.66■■□□□ 1.06
SMPD2O60906 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMPD2O60906 MIR219A2-201ENST00000608502 1504 ntBASIC21.65■■□□□ 1.06
SMPD2O60906 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.65■■□□□ 1.06
SMPD2O60906 AC126177.7-201ENST00000547904 679 ntBASIC21.65■■□□□ 1.06
SMPD2O60906 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
SMPD2O60906 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMPD2O60906 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMPD2O60906 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMPD2O60906 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms