Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 AP004609.3-201ENST00000610705 1884 ntBASIC24.33■■□□□ 1.49
NPHS1O60500 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
NPHS1O60500 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.33■■□□□ 1.48
NPHS1O60500 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.32■■□□□ 1.48
NPHS1O60500 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.31■■□□□ 1.48
NPHS1O60500 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
NPHS1O60500 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
NPHS1O60500 DUSP8P4-201ENST00000399538 1761 ntBASIC24.31■■□□□ 1.48
NPHS1O60500 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
NPHS1O60500 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
NPHS1O60500 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NPHS1O60500 AC092803.2-201ENST00000564287 1899 ntBASIC24.3■■□□□ 1.48
NPHS1O60500 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
NPHS1O60500 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NPHS1O60500 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NPHS1O60500 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.28■■□□□ 1.48
NPHS1O60500 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
NPHS1O60500 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.28■■□□□ 1.48
NPHS1O60500 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.28■■□□□ 1.48
NPHS1O60500 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.28■■□□□ 1.48
NPHS1O60500 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
NPHS1O60500 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.28■■□□□ 1.48
NPHS1O60500 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NPHS1O60500 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
NPHS1O60500 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
NPHS1O60500 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.27■■□□□ 1.48
NPHS1O60500 AP006261.1-201ENST00000584783 668 ntBASIC24.27■■□□□ 1.48
NPHS1O60500 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
NPHS1O60500 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.26■■□□□ 1.47
NPHS1O60500 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.26■■□□□ 1.47
NPHS1O60500 AC110285.7-201ENST00000624417 1536 ntBASIC24.25■■□□□ 1.47
NPHS1O60500 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
NPHS1O60500 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.25■■□□□ 1.47
NPHS1O60500 AC020928.2-201ENST00000588717 2197 ntBASIC24.25■■□□□ 1.47
NPHS1O60500 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NPHS1O60500 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.24■■□□□ 1.47
NPHS1O60500 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
NPHS1O60500 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NPHS1O60500 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
NPHS1O60500 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NPHS1O60500 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
NPHS1O60500 AC142472.1-201ENST00000612013 1741 ntBASIC24.23■■□□□ 1.47
NPHS1O60500 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
NPHS1O60500 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
NPHS1O60500 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
NPHS1O60500 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.23■■□□□ 1.47
NPHS1O60500 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NPHS1O60500 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NPHS1O60500 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
NPHS1O60500 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NPHS1O60500 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
NPHS1O60500 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NPHS1O60500 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
NPHS1O60500 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
NPHS1O60500 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
NPHS1O60500 AC087741.3-201ENST00000624270 1347 ntBASIC24.2■■□□□ 1.46
NPHS1O60500 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
NPHS1O60500 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
NPHS1O60500 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
NPHS1O60500 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
NPHS1O60500 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
NPHS1O60500 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
NPHS1O60500 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.18■■□□□ 1.46
NPHS1O60500 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NPHS1O60500 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
NPHS1O60500 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.17■■□□□ 1.46
NPHS1O60500 WHAMMP3-201ENST00000611636 1609 ntBASIC24.17■■□□□ 1.46
NPHS1O60500 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
NPHS1O60500 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
NPHS1O60500 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
NPHS1O60500 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
NPHS1O60500 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NPHS1O60500 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
NPHS1O60500 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
NPHS1O60500 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NPHS1O60500 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.17■■□□□ 1.46
NPHS1O60500 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
NPHS1O60500 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
NPHS1O60500 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.16■■□□□ 1.46
NPHS1O60500 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.16■■□□□ 1.46
NPHS1O60500 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.16■■□□□ 1.46
NPHS1O60500 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.16■■□□□ 1.46
NPHS1O60500 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
NPHS1O60500 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.15■■□□□ 1.46
NPHS1O60500 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
NPHS1O60500 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
NPHS1O60500 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
NPHS1O60500 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
NPHS1O60500 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.14■■□□□ 1.45
NPHS1O60500 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.14■■□□□ 1.45
NPHS1O60500 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
NPHS1O60500 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
NPHS1O60500 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
NPHS1O60500 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
NPHS1O60500 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
NPHS1O60500 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
NPHS1O60500 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
NPHS1O60500 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.12■■□□□ 1.45
NPHS1O60500 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
NPHS1O60500 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms