Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 AP004609.3-201ENST00000610705 1884 ntBASIC24.33■■□□□ 1.49
NPHS1O60500 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
NPHS1O60500 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.33■■□□□ 1.48
NPHS1O60500 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.32■■□□□ 1.48
NPHS1O60500 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.31■■□□□ 1.48
NPHS1O60500 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
NPHS1O60500 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
NPHS1O60500 DUSP8P4-201ENST00000399538 1761 ntBASIC24.31■■□□□ 1.48
NPHS1O60500 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
NPHS1O60500 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
NPHS1O60500 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NPHS1O60500 AC092803.2-201ENST00000564287 1899 ntBASIC24.3■■□□□ 1.48
NPHS1O60500 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
NPHS1O60500 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NPHS1O60500 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NPHS1O60500 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.28■■□□□ 1.48
NPHS1O60500 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
NPHS1O60500 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.28■■□□□ 1.48
NPHS1O60500 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.28■■□□□ 1.48
NPHS1O60500 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.28■■□□□ 1.48
NPHS1O60500 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
NPHS1O60500 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.28■■□□□ 1.48
NPHS1O60500 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NPHS1O60500 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
NPHS1O60500 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
NPHS1O60500 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.27■■□□□ 1.48
NPHS1O60500 AP006261.1-201ENST00000584783 668 ntBASIC24.27■■□□□ 1.48
NPHS1O60500 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
NPHS1O60500 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.26■■□□□ 1.47
NPHS1O60500 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.26■■□□□ 1.47
NPHS1O60500 AC110285.7-201ENST00000624417 1536 ntBASIC24.25■■□□□ 1.47
NPHS1O60500 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
NPHS1O60500 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.25■■□□□ 1.47
NPHS1O60500 AC020928.2-201ENST00000588717 2197 ntBASIC24.25■■□□□ 1.47
NPHS1O60500 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NPHS1O60500 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.24■■□□□ 1.47
NPHS1O60500 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
NPHS1O60500 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NPHS1O60500 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
NPHS1O60500 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NPHS1O60500 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
NPHS1O60500 AC142472.1-201ENST00000612013 1741 ntBASIC24.23■■□□□ 1.47
NPHS1O60500 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
NPHS1O60500 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
NPHS1O60500 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
NPHS1O60500 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.23■■□□□ 1.47
NPHS1O60500 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NPHS1O60500 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NPHS1O60500 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
NPHS1O60500 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NPHS1O60500 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
NPHS1O60500 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NPHS1O60500 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
NPHS1O60500 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
NPHS1O60500 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
NPHS1O60500 AC087741.3-201ENST00000624270 1347 ntBASIC24.2■■□□□ 1.46
NPHS1O60500 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
NPHS1O60500 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
NPHS1O60500 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
NPHS1O60500 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
NPHS1O60500 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
NPHS1O60500 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
NPHS1O60500 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.18■■□□□ 1.46
NPHS1O60500 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NPHS1O60500 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
NPHS1O60500 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.17■■□□□ 1.46
NPHS1O60500 WHAMMP3-201ENST00000611636 1609 ntBASIC24.17■■□□□ 1.46
NPHS1O60500 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
NPHS1O60500 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
NPHS1O60500 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
NPHS1O60500 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
NPHS1O60500 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NPHS1O60500 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
NPHS1O60500 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
NPHS1O60500 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NPHS1O60500 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.17■■□□□ 1.46
NPHS1O60500 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
NPHS1O60500 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
NPHS1O60500 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.16■■□□□ 1.46
NPHS1O60500 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.16■■□□□ 1.46
NPHS1O60500 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.16■■□□□ 1.46
NPHS1O60500 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.16■■□□□ 1.46
NPHS1O60500 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
NPHS1O60500 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.15■■□□□ 1.46
NPHS1O60500 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
NPHS1O60500 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
NPHS1O60500 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
NPHS1O60500 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
NPHS1O60500 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.14■■□□□ 1.45
NPHS1O60500 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.14■■□□□ 1.45
NPHS1O60500 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
NPHS1O60500 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
NPHS1O60500 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
NPHS1O60500 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
NPHS1O60500 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
NPHS1O60500 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
NPHS1O60500 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
NPHS1O60500 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.12■■□□□ 1.45
NPHS1O60500 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
NPHS1O60500 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms