Protein–RNA interactions for Protein: O14994

SYN3, Synapsin-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3O14994 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
SYN3O14994 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.66■■□□□ 1.86
SYN3O14994 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.65■■□□□ 1.86
SYN3O14994 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SYN3O14994 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.65■■□□□ 1.86
SYN3O14994 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.65■■□□□ 1.86
SYN3O14994 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
SYN3O14994 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
SYN3O14994 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
SYN3O14994 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
SYN3O14994 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.64■■□□□ 1.86
SYN3O14994 AC012354.3-201ENST00000623734 483 ntBASIC26.64■■□□□ 1.86
SYN3O14994 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.64■■□□□ 1.86
SYN3O14994 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
SYN3O14994 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
SYN3O14994 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.62■■□□□ 1.85
SYN3O14994 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.62■■□□□ 1.85
SYN3O14994 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SYN3O14994 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SYN3O14994 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SYN3O14994 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
SYN3O14994 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SYN3O14994 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SYN3O14994 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SYN3O14994 AC007029.1-201ENST00000604183 313 ntBASIC26.61■■□□□ 1.85
SYN3O14994 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.61■■□□□ 1.85
SYN3O14994 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SYN3O14994 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.59■■□□□ 1.85
SYN3O14994 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
SYN3O14994 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
SYN3O14994 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SYN3O14994 SMPD5-203ENST00000639008 1464 ntBASIC26.59■■□□□ 1.85
SYN3O14994 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SYN3O14994 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SYN3O14994 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SYN3O14994 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
SYN3O14994 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SYN3O14994 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SYN3O14994 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SYN3O14994 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SYN3O14994 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.58■■□□□ 1.85
SYN3O14994 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.58■■□□□ 1.84
SYN3O14994 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
SYN3O14994 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SYN3O14994 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SYN3O14994 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SYN3O14994 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SYN3O14994 AC025884.2-201ENST00000553429 711 ntBASIC26.56■■□□□ 1.84
SYN3O14994 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
SYN3O14994 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.55■■□□□ 1.84
SYN3O14994 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
SYN3O14994 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.55■■□□□ 1.84
SYN3O14994 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
SYN3O14994 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.54■■□□□ 1.84
SYN3O14994 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
SYN3O14994 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
SYN3O14994 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SYN3O14994 KRT18P60-201ENST00000312876 1297 ntBASIC26.53■■□□□ 1.84
SYN3O14994 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SYN3O14994 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SYN3O14994 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SYN3O14994 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SYN3O14994 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SYN3O14994 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.51■■□□□ 1.83
SYN3O14994 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.51■■□□□ 1.83
SYN3O14994 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SYN3O14994 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SYN3O14994 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SYN3O14994 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SYN3O14994 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SYN3O14994 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
SYN3O14994 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
SYN3O14994 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
SYN3O14994 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.49■■□□□ 1.83
SYN3O14994 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.48■■□□□ 1.83
SYN3O14994 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
SYN3O14994 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SYN3O14994 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.47■■□□□ 1.83
SYN3O14994 AC009831.1-201ENST00000580420 1582 ntBASIC26.47■■□□□ 1.83
SYN3O14994 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC26.47■■□□□ 1.83
SYN3O14994 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SYN3O14994 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SYN3O14994 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
SYN3O14994 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.46■■□□□ 1.83
SYN3O14994 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
SYN3O14994 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.46■■□□□ 1.83
SYN3O14994 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC26.46■■□□□ 1.83
SYN3O14994 RP9P-202ENST00000450133 1212 ntBASIC26.45■■□□□ 1.82
SYN3O14994 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC26.45■■□□□ 1.82
SYN3O14994 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.45■■□□□ 1.82
SYN3O14994 AL033527.3-201ENST00000566366 1196 ntBASIC26.45■■□□□ 1.82
SYN3O14994 AC133552.2-201ENST00000619106 1032 ntBASIC26.45■■□□□ 1.82
SYN3O14994 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
SYN3O14994 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
SYN3O14994 TSPY13P-201ENST00000338964 914 ntBASIC26.44■■□□□ 1.82
SYN3O14994 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SYN3O14994 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
SYN3O14994 WHAMMP3-201ENST00000611636 1609 ntBASIC26.43■■□□□ 1.82
SYN3O14994 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SYN3O14994 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms