Protein–RNA interactions for Protein: O00453

LST1, Leukocyte-specific transcript 1 protein, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LST1O00453 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC16.28■□□□□ 0.2
LST1O00453 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
LST1O00453 AC092803.2-201ENST00000564287 1899 ntBASIC16.27■□□□□ 0.2
LST1O00453 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LST1O00453 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LST1O00453 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LST1O00453 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LST1O00453 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LST1O00453 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LST1O00453 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LST1O00453 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LST1O00453 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LST1O00453 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LST1O00453 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LST1O00453 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
LST1O00453 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LST1O00453 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LST1O00453 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LST1O00453 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LST1O00453 CLDN5-201ENST00000403084 2357 ntBASIC16.25■□□□□ 0.19
LST1O00453 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC16.25■□□□□ 0.19
LST1O00453 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LST1O00453 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LST1O00453 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC16.24■□□□□ 0.19
LST1O00453 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC16.24■□□□□ 0.19
LST1O00453 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
LST1O00453 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
LST1O00453 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LST1O00453 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
LST1O00453 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LST1O00453 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LST1O00453 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LST1O00453 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LST1O00453 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC16.22■□□□□ 0.19
LST1O00453 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LST1O00453 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC16.21■□□□□ 0.19
LST1O00453 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
LST1O00453 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
LST1O00453 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LST1O00453 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LST1O00453 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LST1O00453 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LST1O00453 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC16.21■□□□□ 0.19
LST1O00453 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LST1O00453 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
LST1O00453 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC16.21■□□□□ 0.18
LST1O00453 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LST1O00453 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LST1O00453 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LST1O00453 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LST1O00453 AC068473.5-201ENST00000616428 2072 ntBASIC16.2■□□□□ 0.18
LST1O00453 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LST1O00453 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LST1O00453 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LST1O00453 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LST1O00453 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LST1O00453 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LST1O00453 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
LST1O00453 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LST1O00453 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LST1O00453 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LST1O00453 PREB-202ENST00000406567 1910 ntTSL 5 BASIC16.18■□□□□ 0.18
LST1O00453 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LST1O00453 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LST1O00453 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LST1O00453 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LST1O00453 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LST1O00453 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LST1O00453 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LST1O00453 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC16.17■□□□□ 0.18
LST1O00453 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LST1O00453 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LST1O00453 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LST1O00453 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LST1O00453 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
LST1O00453 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC16.16■□□□□ 0.18
LST1O00453 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LST1O00453 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LST1O00453 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LST1O00453 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC16.16■□□□□ 0.18
LST1O00453 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LST1O00453 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
LST1O00453 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LST1O00453 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LST1O00453 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LST1O00453 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
LST1O00453 AC010864.1-201ENST00000609407 1511 ntBASIC16.14■□□□□ 0.18
LST1O00453 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LST1O00453 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LST1O00453 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LST1O00453 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LST1O00453 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC16.14■□□□□ 0.17
LST1O00453 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LST1O00453 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LST1O00453 AC142381.3-201ENST00000568208 1670 ntBASIC16.13■□□□□ 0.17
LST1O00453 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LST1O00453 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC16.13■□□□□ 0.17
LST1O00453 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LST1O00453 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LST1O00453 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms