Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MEIS3P1A6NDR6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
MEIS3P1A6NDR6 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
MEIS3P1A6NDR6 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MEIS3P1A6NDR6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
MEIS3P1A6NDR6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MEIS3P1A6NDR6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MEIS3P1A6NDR6 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MEIS3P1A6NDR6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MEIS3P1A6NDR6 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.22■□□□□ 0.99
MEIS3P1A6NDR6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MEIS3P1A6NDR6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
MEIS3P1A6NDR6 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.21■□□□□ 0.99
MEIS3P1A6NDR6 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
MEIS3P1A6NDR6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
MEIS3P1A6NDR6 AC092803.2-201ENST00000564287 1899 ntBASIC21.21■□□□□ 0.99
MEIS3P1A6NDR6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.21■□□□□ 0.99
MEIS3P1A6NDR6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
MEIS3P1A6NDR6 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
MEIS3P1A6NDR6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
MEIS3P1A6NDR6 AC093323.1-202ENST00000635031 2045 ntBASIC21.19■□□□□ 0.98
MEIS3P1A6NDR6 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
MEIS3P1A6NDR6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MEIS3P1A6NDR6 AL391121.1-201ENST00000607967 1349 ntBASIC21.19■□□□□ 0.98
MEIS3P1A6NDR6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.19■□□□□ 0.98
MEIS3P1A6NDR6 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
MEIS3P1A6NDR6 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
MEIS3P1A6NDR6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
MEIS3P1A6NDR6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.18■□□□□ 0.98
MEIS3P1A6NDR6 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MEIS3P1A6NDR6 DUSP8P4-201ENST00000399538 1761 ntBASIC21.18■□□□□ 0.98
MEIS3P1A6NDR6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MEIS3P1A6NDR6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.17■□□□□ 0.98
MEIS3P1A6NDR6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MEIS3P1A6NDR6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MEIS3P1A6NDR6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.16■□□□□ 0.98
MEIS3P1A6NDR6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MEIS3P1A6NDR6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.15■□□□□ 0.98
MEIS3P1A6NDR6 AC135983.2-203ENST00000454486 1613 ntBASIC21.15■□□□□ 0.98
MEIS3P1A6NDR6 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MEIS3P1A6NDR6 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.15■□□□□ 0.98
MEIS3P1A6NDR6 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MEIS3P1A6NDR6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MEIS3P1A6NDR6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.14■□□□□ 0.98
MEIS3P1A6NDR6 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
MEIS3P1A6NDR6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MEIS3P1A6NDR6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MEIS3P1A6NDR6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MEIS3P1A6NDR6 WHAMMP2-203ENST00000563942 1603 ntBASIC21.14■□□□□ 0.97
MEIS3P1A6NDR6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
MEIS3P1A6NDR6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MEIS3P1A6NDR6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
MEIS3P1A6NDR6 AP004609.3-201ENST00000610705 1884 ntBASIC21.13■□□□□ 0.97
MEIS3P1A6NDR6 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MEIS3P1A6NDR6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
MEIS3P1A6NDR6 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
MEIS3P1A6NDR6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
MEIS3P1A6NDR6 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.13■□□□□ 0.97
MEIS3P1A6NDR6 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MEIS3P1A6NDR6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
MEIS3P1A6NDR6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MEIS3P1A6NDR6 CAHM-201ENST00000604200 896 ntBASIC21.12■□□□□ 0.97
MEIS3P1A6NDR6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
MEIS3P1A6NDR6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
MEIS3P1A6NDR6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.11■□□□□ 0.97
MEIS3P1A6NDR6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
MEIS3P1A6NDR6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
MEIS3P1A6NDR6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
MEIS3P1A6NDR6 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MEIS3P1A6NDR6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
MEIS3P1A6NDR6 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MEIS3P1A6NDR6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.09■□□□□ 0.97
MEIS3P1A6NDR6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.09■□□□□ 0.97
MEIS3P1A6NDR6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MEIS3P1A6NDR6 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.09■□□□□ 0.97
MEIS3P1A6NDR6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MEIS3P1A6NDR6 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.08■□□□□ 0.97
MEIS3P1A6NDR6 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MEIS3P1A6NDR6 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
MEIS3P1A6NDR6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
MEIS3P1A6NDR6 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
MEIS3P1A6NDR6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
MEIS3P1A6NDR6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MEIS3P1A6NDR6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
MEIS3P1A6NDR6 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MEIS3P1A6NDR6 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MEIS3P1A6NDR6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MEIS3P1A6NDR6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
MEIS3P1A6NDR6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
MEIS3P1A6NDR6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
MEIS3P1A6NDR6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
MEIS3P1A6NDR6 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.06■□□□□ 0.96
MEIS3P1A6NDR6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MEIS3P1A6NDR6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.05■□□□□ 0.96
MEIS3P1A6NDR6 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MEIS3P1A6NDR6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MEIS3P1A6NDR6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MEIS3P1A6NDR6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MEIS3P1A6NDR6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.05■□□□□ 0.96
MEIS3P1A6NDR6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms