Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.01■■□□□ 1.27
SH3D21A4FU49 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
SH3D21A4FU49 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SH3D21A4FU49 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
SH3D21A4FU49 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SH3D21A4FU49 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23■■□□□ 1.27
SH3D21A4FU49 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SH3D21A4FU49 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.99■■□□□ 1.27
SH3D21A4FU49 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22.99■■□□□ 1.27
SH3D21A4FU49 AC091060.1-201ENST00000623524 1766 ntBASIC22.99■■□□□ 1.27
SH3D21A4FU49 AC127502.1-201ENST00000399971 1502 ntBASIC22.98■■□□□ 1.27
SH3D21A4FU49 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SH3D21A4FU49 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SH3D21A4FU49 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
SH3D21A4FU49 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SH3D21A4FU49 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SH3D21A4FU49 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
SH3D21A4FU49 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SH3D21A4FU49 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
SH3D21A4FU49 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SH3D21A4FU49 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SH3D21A4FU49 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
SH3D21A4FU49 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.96■■□□□ 1.27
SH3D21A4FU49 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SH3D21A4FU49 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SH3D21A4FU49 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SH3D21A4FU49 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
SH3D21A4FU49 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
SH3D21A4FU49 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SH3D21A4FU49 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SH3D21A4FU49 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SH3D21A4FU49 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
SH3D21A4FU49 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SH3D21A4FU49 AC100797.4-201ENST00000631653 1827 ntBASIC22.93■■□□□ 1.26
SH3D21A4FU49 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SH3D21A4FU49 AP002414.2-202ENST00000590929 1450 ntBASIC22.92■■□□□ 1.26
SH3D21A4FU49 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SH3D21A4FU49 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
SH3D21A4FU49 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
SH3D21A4FU49 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SH3D21A4FU49 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SH3D21A4FU49 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SH3D21A4FU49 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.91■■□□□ 1.26
SH3D21A4FU49 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SH3D21A4FU49 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.91■■□□□ 1.26
SH3D21A4FU49 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SH3D21A4FU49 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC22.91■■□□□ 1.26
SH3D21A4FU49 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SH3D21A4FU49 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.91■■□□□ 1.26
SH3D21A4FU49 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.9■■□□□ 1.26
SH3D21A4FU49 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
SH3D21A4FU49 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SH3D21A4FU49 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SH3D21A4FU49 DUX4L13-201ENST00000554103 1267 ntBASIC22.89■■□□□ 1.25
SH3D21A4FU49 DUX4L15-201ENST00000611059 1267 ntBASIC22.89■■□□□ 1.25
SH3D21A4FU49 DUX4L23-201ENST00000615195 1269 ntBASIC22.89■■□□□ 1.25
SH3D21A4FU49 DUX4L24-201ENST00000617576 1269 ntBASIC22.89■■□□□ 1.25
SH3D21A4FU49 DUX4L22-201ENST00000618238 1269 ntBASIC22.89■■□□□ 1.25
SH3D21A4FU49 DUX4L20-201ENST00000619712 1269 ntBASIC22.89■■□□□ 1.25
SH3D21A4FU49 DUX4L21-201ENST00000622058 1269 ntBASIC22.89■■□□□ 1.25
SH3D21A4FU49 DUX4L10-201ENST00000622460 1267 ntBASIC22.89■■□□□ 1.25
SH3D21A4FU49 DUX4L25-201ENST00000624915 1269 ntBASIC22.89■■□□□ 1.25
SH3D21A4FU49 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC22.89■■□□□ 1.25
SH3D21A4FU49 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SH3D21A4FU49 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SH3D21A4FU49 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.89■■□□□ 1.25
SH3D21A4FU49 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC22.88■■□□□ 1.25
SH3D21A4FU49 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.88■■□□□ 1.25
SH3D21A4FU49 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
SH3D21A4FU49 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
SH3D21A4FU49 AC145676.1-201ENST00000514988 2004 ntBASIC22.87■■□□□ 1.25
SH3D21A4FU49 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.87■■□□□ 1.25
SH3D21A4FU49 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SH3D21A4FU49 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.86■■□□□ 1.25
SH3D21A4FU49 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
SH3D21A4FU49 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
SH3D21A4FU49 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SH3D21A4FU49 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
SH3D21A4FU49 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.85■■□□□ 1.25
SH3D21A4FU49 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SH3D21A4FU49 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SH3D21A4FU49 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SH3D21A4FU49 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SH3D21A4FU49 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.83■■□□□ 1.25
SH3D21A4FU49 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
SH3D21A4FU49 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.83■■□□□ 1.25
SH3D21A4FU49 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SH3D21A4FU49 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.83■■□□□ 1.25
SH3D21A4FU49 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.83■■□□□ 1.25
SH3D21A4FU49 HSD17B1P1-201ENST00000590052 955 ntBASIC22.83■■□□□ 1.25
SH3D21A4FU49 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.83■■□□□ 1.25
SH3D21A4FU49 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.83■■□□□ 1.25
SH3D21A4FU49 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SH3D21A4FU49 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
SH3D21A4FU49 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SH3D21A4FU49 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
SH3D21A4FU49 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.82■■□□□ 1.24
SH3D21A4FU49 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
SH3D21A4FU49 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SH3D21A4FU49 METRNL-202ENST00000570778 967 ntTSL 5 BASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms