Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV27A0A0K0K1C4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV27A0A0K0K1C4 AP004609.3-201ENST00000610705 1884 ntBASIC17.6■□□□□ 0.41
TRBV27A0A0K0K1C4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TRBV27A0A0K0K1C4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV27A0A0K0K1C4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TRBV27A0A0K0K1C4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV27A0A0K0K1C4 RPS2-209ENST00000529806 993 ntTSL 3 BASIC17.59■□□□□ 0.41
TRBV27A0A0K0K1C4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
TRBV27A0A0K0K1C4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
TRBV27A0A0K0K1C4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC17.58■□□□□ 0.41
TRBV27A0A0K0K1C4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TRBV27A0A0K0K1C4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC17.58■□□□□ 0.4
TRBV27A0A0K0K1C4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC17.58■□□□□ 0.4
TRBV27A0A0K0K1C4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV27A0A0K0K1C4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV27A0A0K0K1C4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC17.58■□□□□ 0.4
TRBV27A0A0K0K1C4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC17.58■□□□□ 0.4
TRBV27A0A0K0K1C4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV27A0A0K0K1C4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV27A0A0K0K1C4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC17.57■□□□□ 0.4
TRBV27A0A0K0K1C4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV27A0A0K0K1C4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV27A0A0K0K1C4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV27A0A0K0K1C4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV27A0A0K0K1C4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV27A0A0K0K1C4 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV27A0A0K0K1C4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC17.57■□□□□ 0.4
TRBV27A0A0K0K1C4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV27A0A0K0K1C4 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV27A0A0K0K1C4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC17.57■□□□□ 0.4
TRBV27A0A0K0K1C4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC17.56■□□□□ 0.4
TRBV27A0A0K0K1C4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRBV27A0A0K0K1C4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.56■□□□□ 0.4
TRBV27A0A0K0K1C4 MIR762-201ENST00000390236 83 ntBASIC17.56■□□□□ 0.4
TRBV27A0A0K0K1C4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV27A0A0K0K1C4 LINC00273-201ENST00000539813 1452 ntBASIC17.56■□□□□ 0.4
TRBV27A0A0K0K1C4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV27A0A0K0K1C4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV27A0A0K0K1C4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TRBV27A0A0K0K1C4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV27A0A0K0K1C4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV27A0A0K0K1C4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV27A0A0K0K1C4 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRBV27A0A0K0K1C4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC17.55■□□□□ 0.4
TRBV27A0A0K0K1C4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV27A0A0K0K1C4 AC093323.1-202ENST00000635031 2045 ntBASIC17.55■□□□□ 0.4
TRBV27A0A0K0K1C4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV27A0A0K0K1C4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV27A0A0K0K1C4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV27A0A0K0K1C4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV27A0A0K0K1C4 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV27A0A0K0K1C4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV27A0A0K0K1C4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV27A0A0K0K1C4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC17.54■□□□□ 0.4
TRBV27A0A0K0K1C4 AC136428.2-201ENST00000563187 214 ntBASIC17.54■□□□□ 0.4
TRBV27A0A0K0K1C4 CHML-205ENST00000638160 705 ntTSL 3 BASIC17.54■□□□□ 0.4
TRBV27A0A0K0K1C4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC17.53■□□□□ 0.4
TRBV27A0A0K0K1C4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV27A0A0K0K1C4 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV27A0A0K0K1C4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV27A0A0K0K1C4 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV27A0A0K0K1C4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV27A0A0K0K1C4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV27A0A0K0K1C4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV27A0A0K0K1C4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV27A0A0K0K1C4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV27A0A0K0K1C4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV27A0A0K0K1C4 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV27A0A0K0K1C4 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV27A0A0K0K1C4 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC17.51■□□□□ 0.39
TRBV27A0A0K0K1C4 AC108673.1-201ENST00000510422 1159 ntBASIC17.51■□□□□ 0.39
TRBV27A0A0K0K1C4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV27A0A0K0K1C4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC17.51■□□□□ 0.39
TRBV27A0A0K0K1C4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC17.51■□□□□ 0.39
TRBV27A0A0K0K1C4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV27A0A0K0K1C4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRBV27A0A0K0K1C4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV27A0A0K0K1C4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC17.5■□□□□ 0.39
TRBV27A0A0K0K1C4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC17.5■□□□□ 0.39
TRBV27A0A0K0K1C4 AC097358.2-201ENST00000607541 1159 ntBASIC17.5■□□□□ 0.39
TRBV27A0A0K0K1C4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV27A0A0K0K1C4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC17.5■□□□□ 0.39
TRBV27A0A0K0K1C4 AC142472.1-201ENST00000612013 1741 ntBASIC17.5■□□□□ 0.39
TRBV27A0A0K0K1C4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV27A0A0K0K1C4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV27A0A0K0K1C4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV27A0A0K0K1C4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC17.49■□□□□ 0.39
TRBV27A0A0K0K1C4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV27A0A0K0K1C4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV27A0A0K0K1C4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRBV27A0A0K0K1C4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV27A0A0K0K1C4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV27A0A0K0K1C4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV27A0A0K0K1C4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV27A0A0K0K1C4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC17.48■□□□□ 0.39
TRBV27A0A0K0K1C4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
TRBV27A0A0K0K1C4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV27A0A0K0K1C4 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV27A0A0K0K1C4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms