Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
TRBV20-1A0A075B6N2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV20-1A0A075B6N2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV20-1A0A075B6N2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV20-1A0A075B6N2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
TRBV20-1A0A075B6N2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
TRBV20-1A0A075B6N2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV20-1A0A075B6N2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV20-1A0A075B6N2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV20-1A0A075B6N2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC16.73■□□□□ 0.27
TRBV20-1A0A075B6N2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TRBV20-1A0A075B6N2 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV20-1A0A075B6N2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV20-1A0A075B6N2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV20-1A0A075B6N2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV20-1A0A075B6N2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV20-1A0A075B6N2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV20-1A0A075B6N2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV20-1A0A075B6N2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV20-1A0A075B6N2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TRBV20-1A0A075B6N2 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC16.71■□□□□ 0.27
TRBV20-1A0A075B6N2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC16.71■□□□□ 0.27
TRBV20-1A0A075B6N2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRBV20-1A0A075B6N2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV20-1A0A075B6N2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC16.7■□□□□ 0.26
TRBV20-1A0A075B6N2 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV20-1A0A075B6N2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV20-1A0A075B6N2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TRBV20-1A0A075B6N2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC16.69■□□□□ 0.26
TRBV20-1A0A075B6N2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.69■□□□□ 0.26
TRBV20-1A0A075B6N2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV20-1A0A075B6N2 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV20-1A0A075B6N2 DUSP8P4-201ENST00000399538 1761 ntBASIC16.69■□□□□ 0.26
TRBV20-1A0A075B6N2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC16.69■□□□□ 0.26
TRBV20-1A0A075B6N2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV20-1A0A075B6N2 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TRBV20-1A0A075B6N2 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV20-1A0A075B6N2 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV20-1A0A075B6N2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV20-1A0A075B6N2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV20-1A0A075B6N2 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV20-1A0A075B6N2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV20-1A0A075B6N2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV20-1A0A075B6N2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TRBV20-1A0A075B6N2 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV20-1A0A075B6N2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TRBV20-1A0A075B6N2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV20-1A0A075B6N2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRBV20-1A0A075B6N2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC16.67■□□□□ 0.26
TRBV20-1A0A075B6N2 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV20-1A0A075B6N2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV20-1A0A075B6N2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC16.67■□□□□ 0.26
TRBV20-1A0A075B6N2 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV20-1A0A075B6N2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC16.66■□□□□ 0.26
TRBV20-1A0A075B6N2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV20-1A0A075B6N2 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV20-1A0A075B6N2 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV20-1A0A075B6N2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRBV20-1A0A075B6N2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV20-1A0A075B6N2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV20-1A0A075B6N2 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV20-1A0A075B6N2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
TRBV20-1A0A075B6N2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV20-1A0A075B6N2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV20-1A0A075B6N2 AC068473.5-201ENST00000616428 2072 ntBASIC16.64■□□□□ 0.25
TRBV20-1A0A075B6N2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV20-1A0A075B6N2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV20-1A0A075B6N2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV20-1A0A075B6N2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV20-1A0A075B6N2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC16.63■□□□□ 0.25
TRBV20-1A0A075B6N2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV20-1A0A075B6N2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV20-1A0A075B6N2 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV20-1A0A075B6N2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV20-1A0A075B6N2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC16.62■□□□□ 0.25
TRBV20-1A0A075B6N2 ERN1-208ENST00000606895 2068 ntBASIC16.62■□□□□ 0.25
TRBV20-1A0A075B6N2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRBV20-1A0A075B6N2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV20-1A0A075B6N2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC16.61■□□□□ 0.25
TRBV20-1A0A075B6N2 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV20-1A0A075B6N2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV20-1A0A075B6N2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
TRBV20-1A0A075B6N2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV20-1A0A075B6N2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV20-1A0A075B6N2 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC16.6■□□□□ 0.25
TRBV20-1A0A075B6N2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC16.6■□□□□ 0.25
TRBV20-1A0A075B6N2 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV20-1A0A075B6N2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC16.6■□□□□ 0.25
TRBV20-1A0A075B6N2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV20-1A0A075B6N2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC16.6■□□□□ 0.25
TRBV20-1A0A075B6N2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.6■□□□□ 0.25
TRBV20-1A0A075B6N2 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV20-1A0A075B6N2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV20-1A0A075B6N2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV20-1A0A075B6N2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC16.6■□□□□ 0.25
TRBV20-1A0A075B6N2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV20-1A0A075B6N2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV20-1A0A075B6N2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV20-1A0A075B6N2 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV20-1A0A075B6N2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms