Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF6Q9Y252 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF6Q9Y252 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RNF6Q9Y252 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RNF6Q9Y252 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RNF6Q9Y252 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF6Q9Y252 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF6Q9Y252 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF6Q9Y252 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
RNF6Q9Y252 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF6Q9Y252 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF6Q9Y252 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF6Q9Y252 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF6Q9Y252 CRYGFP-201ENST00000418459 633 ntBASIC17.38■□□□□ 0.37
RNF6Q9Y252 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF6Q9Y252 AC004980.1-204ENST00000429707 299 ntBASIC17.38■□□□□ 0.37
RNF6Q9Y252 AC104076.2-201ENST00000448912 469 ntBASIC17.38■□□□□ 0.37
RNF6Q9Y252 DUX4L26-201ENST00000489078 1255 ntBASIC17.38■□□□□ 0.37
RNF6Q9Y252 AC097488.1-201ENST00000507834 756 ntBASIC17.38■□□□□ 0.37
RNF6Q9Y252 AC010203.1-204ENST00000548782 407 ntBASIC17.38■□□□□ 0.37
RNF6Q9Y252 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF6Q9Y252 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RNF6Q9Y252 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF6Q9Y252 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF6Q9Y252 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF6Q9Y252 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF6Q9Y252 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF6Q9Y252 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RNF6Q9Y252 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF6Q9Y252 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RNF6Q9Y252 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
RNF6Q9Y252 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RNF6Q9Y252 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF6Q9Y252 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF6Q9Y252 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
RNF6Q9Y252 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF6Q9Y252 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.37■□□□□ 0.37
RNF6Q9Y252 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF6Q9Y252 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF6Q9Y252 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF6Q9Y252 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF6Q9Y252 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
RNF6Q9Y252 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF6Q9Y252 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.37■□□□□ 0.37
RNF6Q9Y252 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.37■□□□□ 0.37
RNF6Q9Y252 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF6Q9Y252 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF6Q9Y252 ATP5G1P1-201ENST00000448724 379 ntBASIC17.37■□□□□ 0.37
RNF6Q9Y252 ECEL1P2-202ENST00000465689 757 ntBASIC17.37■□□□□ 0.37
RNF6Q9Y252 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF6Q9Y252 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.37■□□□□ 0.37
RNF6Q9Y252 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.37■□□□□ 0.37
RNF6Q9Y252 EGLN1P1-201ENST00000531623 762 ntBASIC17.37■□□□□ 0.37
RNF6Q9Y252 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF6Q9Y252 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RNF6Q9Y252 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RNF6Q9Y252 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF6Q9Y252 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF6Q9Y252 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF6Q9Y252 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RNF6Q9Y252 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF6Q9Y252 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF6Q9Y252 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF6Q9Y252 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF6Q9Y252 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF6Q9Y252 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF6Q9Y252 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.37■□□□□ 0.37
RNF6Q9Y252 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
RNF6Q9Y252 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.37■□□□□ 0.37
RNF6Q9Y252 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF6Q9Y252 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF6Q9Y252 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.36■□□□□ 0.37
RNF6Q9Y252 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF6Q9Y252 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF6Q9Y252 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.36■□□□□ 0.37
RNF6Q9Y252 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF6Q9Y252 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF6Q9Y252 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
RNF6Q9Y252 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.36■□□□□ 0.37
RNF6Q9Y252 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF6Q9Y252 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF6Q9Y252 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF6Q9Y252 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF6Q9Y252 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF6Q9Y252 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RNF6Q9Y252 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF6Q9Y252 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF6Q9Y252 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF6Q9Y252 NTF6B-201ENST00000591913 560 ntBASIC17.36■□□□□ 0.37
RNF6Q9Y252 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.36■□□□□ 0.37
RNF6Q9Y252 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF6Q9Y252 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF6Q9Y252 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RNF6Q9Y252 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF6Q9Y252 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF6Q9Y252 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF6Q9Y252 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF6Q9Y252 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF6Q9Y252 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RNF6Q9Y252 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms