Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHD7Q9P2D1 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHD7Q9P2D1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.5■□□□□ 0.71
CHD7Q9P2D1 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CHD7Q9P2D1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHD7Q9P2D1 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CHD7Q9P2D1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHD7Q9P2D1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHD7Q9P2D1 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHD7Q9P2D1 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
CHD7Q9P2D1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHD7Q9P2D1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.49■□□□□ 0.71
CHD7Q9P2D1 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.49■□□□□ 0.71
CHD7Q9P2D1 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.49■□□□□ 0.71
CHD7Q9P2D1 AC005082.1-201ENST00000413042 2259 ntBASIC19.49■□□□□ 0.71
CHD7Q9P2D1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CHD7Q9P2D1 Z98044.1-201ENST00000632503 1764 ntBASIC19.49■□□□□ 0.71
CHD7Q9P2D1 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.49■□□□□ 0.71
CHD7Q9P2D1 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHD7Q9P2D1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CHD7Q9P2D1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHD7Q9P2D1 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHD7Q9P2D1 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.49■□□□□ 0.71
CHD7Q9P2D1 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.49■□□□□ 0.71
CHD7Q9P2D1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHD7Q9P2D1 AC008735.5-201ENST00000623544 497 ntBASIC19.49■□□□□ 0.71
CHD7Q9P2D1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHD7Q9P2D1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHD7Q9P2D1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHD7Q9P2D1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.48■□□□□ 0.71
CHD7Q9P2D1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHD7Q9P2D1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHD7Q9P2D1 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CHD7Q9P2D1 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.48■□□□□ 0.71
CHD7Q9P2D1 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
CHD7Q9P2D1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
CHD7Q9P2D1 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.48■□□□□ 0.71
CHD7Q9P2D1 MTMR9LP-203ENST00000426597 1545 ntBASIC19.48■□□□□ 0.71
CHD7Q9P2D1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.48■□□□□ 0.71
CHD7Q9P2D1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHD7Q9P2D1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHD7Q9P2D1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHD7Q9P2D1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHD7Q9P2D1 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHD7Q9P2D1 CNN2P11-201ENST00000429351 262 ntBASIC19.48■□□□□ 0.71
CHD7Q9P2D1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.48■□□□□ 0.71
CHD7Q9P2D1 AC092910.1-201ENST00000482027 1129 ntBASIC19.48■□□□□ 0.71
CHD7Q9P2D1 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.48■□□□□ 0.71
CHD7Q9P2D1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHD7Q9P2D1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CHD7Q9P2D1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHD7Q9P2D1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHD7Q9P2D1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHD7Q9P2D1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.48■□□□□ 0.71
CHD7Q9P2D1 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CHD7Q9P2D1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.47■□□□□ 0.71
CHD7Q9P2D1 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.47■□□□□ 0.71
CHD7Q9P2D1 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.47■□□□□ 0.71
CHD7Q9P2D1 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.47■□□□□ 0.71
CHD7Q9P2D1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHD7Q9P2D1 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CHD7Q9P2D1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.47■□□□□ 0.71
CHD7Q9P2D1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CHD7Q9P2D1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHD7Q9P2D1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHD7Q9P2D1 AC125634.1-201ENST00000438758 1403 ntBASIC19.47■□□□□ 0.71
CHD7Q9P2D1 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CHD7Q9P2D1 KRT18P27-201ENST00000427733 1299 ntBASIC19.47■□□□□ 0.71
CHD7Q9P2D1 ALG1L5P-201ENST00000482043 771 ntBASIC19.47■□□□□ 0.71
CHD7Q9P2D1 SPCS2P1-201ENST00000561636 679 ntBASIC19.47■□□□□ 0.71
CHD7Q9P2D1 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.47■□□□□ 0.71
CHD7Q9P2D1 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.47■□□□□ 0.71
CHD7Q9P2D1 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHD7Q9P2D1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHD7Q9P2D1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.47■□□□□ 0.71
CHD7Q9P2D1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHD7Q9P2D1 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CHD7Q9P2D1 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
CHD7Q9P2D1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHD7Q9P2D1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHD7Q9P2D1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CHD7Q9P2D1 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHD7Q9P2D1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHD7Q9P2D1 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.47■□□□□ 0.71
CHD7Q9P2D1 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.47■□□□□ 0.71
CHD7Q9P2D1 OR7E14P-202ENST00000530490 1290 ntBASIC19.47■□□□□ 0.71
CHD7Q9P2D1 MTDHP5-201ENST00000598980 586 ntBASIC19.47■□□□□ 0.71
CHD7Q9P2D1 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.47■□□□□ 0.71
CHD7Q9P2D1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHD7Q9P2D1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.46■□□□□ 0.71
CHD7Q9P2D1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHD7Q9P2D1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHD7Q9P2D1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHD7Q9P2D1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.46■□□□□ 0.71
CHD7Q9P2D1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CHD7Q9P2D1 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHD7Q9P2D1 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.46■□□□□ 0.71
CHD7Q9P2D1 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.46■□□□□ 0.71
CHD7Q9P2D1 AC113404.2-201ENST00000507884 177 ntBASIC19.46■□□□□ 0.71
CHD7Q9P2D1 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms