Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 MARS-234ENST00000630571 216 ntTSL 5 BASIC15.73■□□□□ 0.11
COMMD9Q9P000 MARS-235ENST00000630803 183 ntTSL 3 BASIC15.73■□□□□ 0.11
COMMD9Q9P000 AC073111.5-205ENST00000641717 521 ntBASIC15.73■□□□□ 0.11
COMMD9Q9P000 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COMMD9Q9P000 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
COMMD9Q9P000 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.73■□□□□ 0.11
COMMD9Q9P000 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COMMD9Q9P000 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
COMMD9Q9P000 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
COMMD9Q9P000 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
COMMD9Q9P000 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COMMD9Q9P000 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COMMD9Q9P000 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
COMMD9Q9P000 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.73■□□□□ 0.11
COMMD9Q9P000 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COMMD9Q9P000 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.73■□□□□ 0.11
COMMD9Q9P000 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.72■□□□□ 0.11
COMMD9Q9P000 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD9Q9P000 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD9Q9P000 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD9Q9P000 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
COMMD9Q9P000 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD9Q9P000 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD9Q9P000 AC084018.2-201ENST00000613093 2607 ntBASIC15.72■□□□□ 0.11
COMMD9Q9P000 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD9Q9P000 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD9Q9P000 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.72■□□□□ 0.11
COMMD9Q9P000 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD9Q9P000 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD9Q9P000 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD9Q9P000 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.72■□□□□ 0.11
COMMD9Q9P000 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC15.72■□□□□ 0.11
COMMD9Q9P000 NME6-213ENST00000451657 871 ntTSL 2 BASIC15.72■□□□□ 0.11
COMMD9Q9P000 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD9Q9P000 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.72■□□□□ 0.11
COMMD9Q9P000 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.72■□□□□ 0.11
COMMD9Q9P000 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
COMMD9Q9P000 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD9Q9P000 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
COMMD9Q9P000 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD9Q9P000 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
COMMD9Q9P000 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD9Q9P000 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD9Q9P000 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD9Q9P000 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD9Q9P000 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD9Q9P000 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD9Q9P000 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD9Q9P000 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.72■□□□□ 0.11
COMMD9Q9P000 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD9Q9P000 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD9Q9P000 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
COMMD9Q9P000 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD9Q9P000 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD9Q9P000 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD9Q9P000 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC15.71■□□□□ 0.11
COMMD9Q9P000 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
COMMD9Q9P000 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD9Q9P000 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD9Q9P000 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
COMMD9Q9P000 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD9Q9P000 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.71■□□□□ 0.11
COMMD9Q9P000 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD9Q9P000 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD9Q9P000 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
COMMD9Q9P000 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD9Q9P000 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC15.71■□□□□ 0.11
COMMD9Q9P000 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.71■□□□□ 0.11
COMMD9Q9P000 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC15.71■□□□□ 0.11
COMMD9Q9P000 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD9Q9P000 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD9Q9P000 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD9Q9P000 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD9Q9P000 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD9Q9P000 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC15.71■□□□□ 0.11
COMMD9Q9P000 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.71■□□□□ 0.1
COMMD9Q9P000 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
COMMD9Q9P000 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
COMMD9Q9P000 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.71■□□□□ 0.1
COMMD9Q9P000 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
COMMD9Q9P000 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
COMMD9Q9P000 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD9Q9P000 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
COMMD9Q9P000 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
COMMD9Q9P000 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
COMMD9Q9P000 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD9Q9P000 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
COMMD9Q9P000 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.7■□□□□ 0.1
COMMD9Q9P000 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD9Q9P000 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
COMMD9Q9P000 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC15.7■□□□□ 0.1
COMMD9Q9P000 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
COMMD9Q9P000 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.7■□□□□ 0.1
COMMD9Q9P000 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD9Q9P000 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD9Q9P000 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD9Q9P000 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
COMMD9Q9P000 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD9Q9P000 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD9Q9P000 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms