Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLE3Q9NRF9 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLE3Q9NRF9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.15■□□□□ 0.34
POLE3Q9NRF9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLE3Q9NRF9 OR6D1P-202ENST00000641007 5290 ntBASIC17.14■□□□□ 0.34
POLE3Q9NRF9 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLE3Q9NRF9 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLE3Q9NRF9 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLE3Q9NRF9 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLE3Q9NRF9 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.14■□□□□ 0.33
POLE3Q9NRF9 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLE3Q9NRF9 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
POLE3Q9NRF9 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLE3Q9NRF9 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
POLE3Q9NRF9 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.14■□□□□ 0.33
POLE3Q9NRF9 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
POLE3Q9NRF9 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
POLE3Q9NRF9 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
POLE3Q9NRF9 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLE3Q9NRF9 TSPY14P-201ENST00000303979 915 ntBASIC17.14■□□□□ 0.33
POLE3Q9NRF9 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.14■□□□□ 0.33
POLE3Q9NRF9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
POLE3Q9NRF9 MIR1238-201ENST00000408483 83 ntBASIC17.14■□□□□ 0.33
POLE3Q9NRF9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
POLE3Q9NRF9 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.14■□□□□ 0.33
POLE3Q9NRF9 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
POLE3Q9NRF9 AL355075.4-201ENST00000554988 638 ntBASIC17.14■□□□□ 0.33
POLE3Q9NRF9 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.14■□□□□ 0.33
POLE3Q9NRF9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.14■□□□□ 0.33
POLE3Q9NRF9 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLE3Q9NRF9 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLE3Q9NRF9 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLE3Q9NRF9 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLE3Q9NRF9 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
POLE3Q9NRF9 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.14■□□□□ 0.33
POLE3Q9NRF9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLE3Q9NRF9 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
POLE3Q9NRF9 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.13■□□□□ 0.33
POLE3Q9NRF9 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
POLE3Q9NRF9 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
POLE3Q9NRF9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
POLE3Q9NRF9 KRT8P50-201ENST00000562022 1438 ntBASIC17.13■□□□□ 0.33
POLE3Q9NRF9 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
POLE3Q9NRF9 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.13■□□□□ 0.33
POLE3Q9NRF9 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
POLE3Q9NRF9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.13■□□□□ 0.33
POLE3Q9NRF9 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
POLE3Q9NRF9 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
POLE3Q9NRF9 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
POLE3Q9NRF9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
POLE3Q9NRF9 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.13■□□□□ 0.33
POLE3Q9NRF9 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.13■□□□□ 0.33
POLE3Q9NRF9 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.13■□□□□ 0.33
POLE3Q9NRF9 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.13■□□□□ 0.33
POLE3Q9NRF9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
POLE3Q9NRF9 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.13■□□□□ 0.33
POLE3Q9NRF9 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.13■□□□□ 0.33
POLE3Q9NRF9 AL354751.1-201ENST00000412768 1863 ntBASIC17.13■□□□□ 0.33
POLE3Q9NRF9 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
POLE3Q9NRF9 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
POLE3Q9NRF9 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.13■□□□□ 0.33
POLE3Q9NRF9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
POLE3Q9NRF9 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.13■□□□□ 0.33
POLE3Q9NRF9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
POLE3Q9NRF9 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLE3Q9NRF9 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLE3Q9NRF9 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLE3Q9NRF9 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLE3Q9NRF9 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLE3Q9NRF9 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLE3Q9NRF9 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
POLE3Q9NRF9 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.12■□□□□ 0.33
POLE3Q9NRF9 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
POLE3Q9NRF9 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLE3Q9NRF9 FER1L4-210ENST00000615531 5998 ntBASIC17.12■□□□□ 0.33
POLE3Q9NRF9 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLE3Q9NRF9 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.12■□□□□ 0.33
POLE3Q9NRF9 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.12■□□□□ 0.33
POLE3Q9NRF9 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLE3Q9NRF9 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.12■□□□□ 0.33
POLE3Q9NRF9 EGLN1P1-201ENST00000531623 762 ntBASIC17.12■□□□□ 0.33
POLE3Q9NRF9 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.12■□□□□ 0.33
POLE3Q9NRF9 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
POLE3Q9NRF9 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.12■□□□□ 0.33
POLE3Q9NRF9 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
POLE3Q9NRF9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.12■□□□□ 0.33
POLE3Q9NRF9 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
POLE3Q9NRF9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLE3Q9NRF9 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
POLE3Q9NRF9 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLE3Q9NRF9 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.12■□□□□ 0.33
POLE3Q9NRF9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLE3Q9NRF9 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLE3Q9NRF9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLE3Q9NRF9 NEFHP1-201ENST00000412845 2629 ntBASIC17.12■□□□□ 0.33
POLE3Q9NRF9 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLE3Q9NRF9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
POLE3Q9NRF9 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.11■□□□□ 0.33
POLE3Q9NRF9 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
POLE3Q9NRF9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms