Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBA1CQ9BQE3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TUBA1CQ9BQE3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBA1CQ9BQE3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBA1CQ9BQE3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TUBA1CQ9BQE3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBA1CQ9BQE3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.43■□□□□ 0.38
TUBA1CQ9BQE3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.43■□□□□ 0.38
TUBA1CQ9BQE3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.43■□□□□ 0.38
TUBA1CQ9BQE3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TUBA1CQ9BQE3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TUBA1CQ9BQE3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBA1CQ9BQE3 HTR7P1-202ENST00000624664 4411 ntBASIC17.43■□□□□ 0.38
TUBA1CQ9BQE3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
TUBA1CQ9BQE3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.43■□□□□ 0.38
TUBA1CQ9BQE3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBA1CQ9BQE3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TUBA1CQ9BQE3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TUBA1CQ9BQE3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBA1CQ9BQE3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.43■□□□□ 0.38
TUBA1CQ9BQE3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 TNRC18P3-201ENST00000441896 2691 ntBASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 MESTP1-201ENST00000404287 994 ntBASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 MIR1238-201ENST00000408483 83 ntBASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 MIR6786-201ENST00000616843 113 ntBASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 FSCN1P1-201ENST00000568912 1481 ntBASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBA1CQ9BQE3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 SLC25A6P5-201ENST00000435663 894 ntBASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 B3GAT3P1-201ENST00000471720 806 ntBASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 AC011506.1-201ENST00000474329 610 ntBASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 AC134043.2-201ENST00000624206 2238 ntBASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TUBA1CQ9BQE3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBA1CQ9BQE3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.4■□□□□ 0.38
TUBA1CQ9BQE3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms