Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
TM9SF2Q99805 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.12■□□□□ 0.33
TM9SF2Q99805 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM9SF2Q99805 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TM9SF2Q99805 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TM9SF2Q99805 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.12■□□□□ 0.33
TM9SF2Q99805 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TM9SF2Q99805 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.12■□□□□ 0.33
TM9SF2Q99805 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.12■□□□□ 0.33
TM9SF2Q99805 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.12■□□□□ 0.33
TM9SF2Q99805 TSPY17P-201ENST00000450329 467 ntBASIC17.12■□□□□ 0.33
TM9SF2Q99805 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.12■□□□□ 0.33
TM9SF2Q99805 CA15P1-201ENST00000481698 905 ntBASIC17.12■□□□□ 0.33
TM9SF2Q99805 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.12■□□□□ 0.33
TM9SF2Q99805 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.12■□□□□ 0.33
TM9SF2Q99805 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.12■□□□□ 0.33
TM9SF2Q99805 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.12■□□□□ 0.33
TM9SF2Q99805 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM9SF2Q99805 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM9SF2Q99805 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM9SF2Q99805 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM9SF2Q99805 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM9SF2Q99805 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.12■□□□□ 0.33
TM9SF2Q99805 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.12■□□□□ 0.33
TM9SF2Q99805 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM9SF2Q99805 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM9SF2Q99805 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TM9SF2Q99805 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM9SF2Q99805 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.12■□□□□ 0.33
TM9SF2Q99805 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM9SF2Q99805 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.12■□□□□ 0.33
TM9SF2Q99805 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TM9SF2Q99805 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM9SF2Q99805 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM9SF2Q99805 KRT8P41-201ENST00000533985 1514 ntBASIC17.11■□□□□ 0.33
TM9SF2Q99805 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM9SF2Q99805 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM9SF2Q99805 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
TM9SF2Q99805 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM9SF2Q99805 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TM9SF2Q99805 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TM9SF2Q99805 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.11■□□□□ 0.33
TM9SF2Q99805 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM9SF2Q99805 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM9SF2Q99805 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM9SF2Q99805 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM9SF2Q99805 HMGA1P5-201ENST00000412453 271 ntBASIC17.11■□□□□ 0.33
TM9SF2Q99805 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM9SF2Q99805 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.11■□□□□ 0.33
TM9SF2Q99805 AL049597.2-201ENST00000565575 961 ntBASIC17.11■□□□□ 0.33
TM9SF2Q99805 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.11■□□□□ 0.33
TM9SF2Q99805 AC010653.2-201ENST00000623505 997 ntBASIC17.11■□□□□ 0.33
TM9SF2Q99805 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TM9SF2Q99805 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.11■□□□□ 0.33
TM9SF2Q99805 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM9SF2Q99805 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM9SF2Q99805 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.11■□□□□ 0.33
TM9SF2Q99805 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.11■□□□□ 0.33
TM9SF2Q99805 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.11■□□□□ 0.33
TM9SF2Q99805 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TM9SF2Q99805 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TM9SF2Q99805 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.11■□□□□ 0.33
TM9SF2Q99805 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.1■□□□□ 0.33
TM9SF2Q99805 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TM9SF2Q99805 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF2Q99805 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF2Q99805 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF2Q99805 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TM9SF2Q99805 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF2Q99805 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.1■□□□□ 0.33
TM9SF2Q99805 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF2Q99805 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.1■□□□□ 0.33
TM9SF2Q99805 KRT18P57-201ENST00000443599 1254 ntBASIC17.1■□□□□ 0.33
TM9SF2Q99805 PRSS44-201ENST00000515154 1146 ntBASIC17.1■□□□□ 0.33
TM9SF2Q99805 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TM9SF2Q99805 CKBP1-201ENST00000565489 1086 ntBASIC17.1■□□□□ 0.33
TM9SF2Q99805 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF2Q99805 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF2Q99805 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF2Q99805 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TM9SF2Q99805 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF2Q99805 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TM9SF2Q99805 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF2Q99805 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.1■□□□□ 0.33
TM9SF2Q99805 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.1■□□□□ 0.33
TM9SF2Q99805 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF2Q99805 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF2Q99805 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.09■□□□□ 0.33
TM9SF2Q99805 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.09■□□□□ 0.33
TM9SF2Q99805 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TM9SF2Q99805 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TM9SF2Q99805 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TM9SF2Q99805 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TM9SF2Q99805 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.09■□□□□ 0.33
TM9SF2Q99805 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
TM9SF2Q99805 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TM9SF2Q99805 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
TM9SF2Q99805 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
TM9SF2Q99805 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.09■□□□□ 0.33
TM9SF2Q99805 AL512604.3-201ENST00000569583 964 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms