Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 MIR3180-5-201ENST00000583743 153 ntBASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 RN7SL606P-201ENST00000472779 293 ntBASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CSMD1Q96PZ7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.65■□□□□ 0.1
CSMD1Q96PZ7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
CSMD1Q96PZ7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.65■□□□□ 0.1
CSMD1Q96PZ7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.65■□□□□ 0.1
CSMD1Q96PZ7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
CSMD1Q96PZ7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSMD1Q96PZ7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSMD1Q96PZ7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.65■□□□□ 0.1
CSMD1Q96PZ7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.65■□□□□ 0.1
CSMD1Q96PZ7 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.65■□□□□ 0.1
CSMD1Q96PZ7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSMD1Q96PZ7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSMD1Q96PZ7 ANKRD18DP-204ENST00000455355 1975 ntBASIC15.65■□□□□ 0.1
CSMD1Q96PZ7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSMD1Q96PZ7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSMD1Q96PZ7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CSMD1Q96PZ7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSMD1Q96PZ7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
CSMD1Q96PZ7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSMD1Q96PZ7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.65■□□□□ 0.1
CSMD1Q96PZ7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CSMD1Q96PZ7 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CSMD1Q96PZ7 AC005034.1-201ENST00000426657 489 ntBASIC15.65■□□□□ 0.1
CSMD1Q96PZ7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.65■□□□□ 0.1
CSMD1Q96PZ7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.65■□□□□ 0.1
CSMD1Q96PZ7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.65■□□□□ 0.1
CSMD1Q96PZ7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CSMD1Q96PZ7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSMD1Q96PZ7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC15.64■□□□□ 0.09
CSMD1Q96PZ7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSMD1Q96PZ7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSMD1Q96PZ7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.64■□□□□ 0.09
CSMD1Q96PZ7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.64■□□□□ 0.09
CSMD1Q96PZ7 VENTXP7-201ENST00000475503 772 ntBASIC15.64■□□□□ 0.09
CSMD1Q96PZ7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CSMD1Q96PZ7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSMD1Q96PZ7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSMD1Q96PZ7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSMD1Q96PZ7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CSMD1Q96PZ7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.64■□□□□ 0.09
CSMD1Q96PZ7 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.64■□□□□ 0.09
CSMD1Q96PZ7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CSMD1Q96PZ7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
CSMD1Q96PZ7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CSMD1Q96PZ7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
CSMD1Q96PZ7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
CSMD1Q96PZ7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.64■□□□□ 0.09
CSMD1Q96PZ7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.64■□□□□ 0.09
CSMD1Q96PZ7 AC093028.1-201ENST00000622998 982 ntBASIC15.64■□□□□ 0.09
CSMD1Q96PZ7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 AC092720.2-201ENST00000602388 1665 ntBASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 AC027612.4-201ENST00000605371 583 ntBASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.63■□□□□ 0.09
CSMD1Q96PZ7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms