Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SPDL1Q96EA4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SPDL1Q96EA4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SPDL1Q96EA4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPDL1Q96EA4 AC012317.2-201ENST00000623305 2251 ntBASIC18.2■□□□□ 0.5
SPDL1Q96EA4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SPDL1Q96EA4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SPDL1Q96EA4 FER1L4-210ENST00000615531 5998 ntBASIC18.2■□□□□ 0.5
SPDL1Q96EA4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SPDL1Q96EA4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SPDL1Q96EA4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SPDL1Q96EA4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.2■□□□□ 0.5
SPDL1Q96EA4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SPDL1Q96EA4 AC091874.3-201ENST00000512672 1195 ntBASIC18.2■□□□□ 0.5
SPDL1Q96EA4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.2■□□□□ 0.5
SPDL1Q96EA4 AC092118.2-201ENST00000613495 667 ntBASIC18.2■□□□□ 0.5
SPDL1Q96EA4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
SPDL1Q96EA4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.2■□□□□ 0.5
SPDL1Q96EA4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.2■□□□□ 0.5
SPDL1Q96EA4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.2■□□□□ 0.5
SPDL1Q96EA4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.2■□□□□ 0.5
SPDL1Q96EA4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.2■□□□□ 0.5
SPDL1Q96EA4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPDL1Q96EA4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
SPDL1Q96EA4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPDL1Q96EA4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.2■□□□□ 0.5
SPDL1Q96EA4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SPDL1Q96EA4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SPDL1Q96EA4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPDL1Q96EA4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPDL1Q96EA4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPDL1Q96EA4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPDL1Q96EA4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.19■□□□□ 0.5
SPDL1Q96EA4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.19■□□□□ 0.5
SPDL1Q96EA4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.19■□□□□ 0.5
SPDL1Q96EA4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SPDL1Q96EA4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPDL1Q96EA4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPDL1Q96EA4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.19■□□□□ 0.5
SPDL1Q96EA4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SPDL1Q96EA4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.19■□□□□ 0.5
SPDL1Q96EA4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.19■□□□□ 0.5
SPDL1Q96EA4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPDL1Q96EA4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPDL1Q96EA4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPDL1Q96EA4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SPDL1Q96EA4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPDL1Q96EA4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPDL1Q96EA4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPDL1Q96EA4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SPDL1Q96EA4 AC026185.1-201ENST00000445748 174 ntBASIC18.19■□□□□ 0.5
SPDL1Q96EA4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
SPDL1Q96EA4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.19■□□□□ 0.5
SPDL1Q96EA4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
SPDL1Q96EA4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SPDL1Q96EA4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPDL1Q96EA4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SPDL1Q96EA4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPDL1Q96EA4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SPDL1Q96EA4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SPDL1Q96EA4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
SPDL1Q96EA4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPDL1Q96EA4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SPDL1Q96EA4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 AC092368.3-202ENST00000574180 1591 ntBASIC18.18■□□□□ 0.5
SPDL1Q96EA4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.18■□□□□ 0.5
SPDL1Q96EA4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 AC092437.1-201ENST00000624794 1048 ntBASIC18.18■□□□□ 0.5
SPDL1Q96EA4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPDL1Q96EA4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms