Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
NPIPB3Q92617 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.58□□□□□ -0.07
NPIPB3Q92617 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
NPIPB3Q92617 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
NPIPB3Q92617 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB3Q92617 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB3Q92617 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
NPIPB3Q92617 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB3Q92617 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.58□□□□□ -0.08
NPIPB3Q92617 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB3Q92617 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB3Q92617 AC008764.6-201ENST00000595909 2069 ntBASIC14.58□□□□□ -0.08
NPIPB3Q92617 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.58□□□□□ -0.08
NPIPB3Q92617 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
NPIPB3Q92617 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB3Q92617 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB3Q92617 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB3Q92617 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB3Q92617 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.58□□□□□ -0.08
NPIPB3Q92617 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.58□□□□□ -0.08
NPIPB3Q92617 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC14.58□□□□□ -0.08
NPIPB3Q92617 CKBP1-201ENST00000565489 1086 ntBASIC14.58□□□□□ -0.08
NPIPB3Q92617 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.58□□□□□ -0.08
NPIPB3Q92617 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.58□□□□□ -0.08
NPIPB3Q92617 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB3Q92617 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB3Q92617 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.58□□□□□ -0.08
NPIPB3Q92617 GATB-213ENST00000515812 1893 ntTSL 5 BASIC14.58□□□□□ -0.08
NPIPB3Q92617 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB3Q92617 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.58□□□□□ -0.08
NPIPB3Q92617 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
NPIPB3Q92617 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB3Q92617 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB3Q92617 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
NPIPB3Q92617 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB3Q92617 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC14.58□□□□□ -0.08
NPIPB3Q92617 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB3Q92617 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB3Q92617 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB3Q92617 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
NPIPB3Q92617 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.58□□□□□ -0.08
NPIPB3Q92617 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB3Q92617 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB3Q92617 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
NPIPB3Q92617 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPB3Q92617 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
NPIPB3Q92617 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB3Q92617 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NPIPB3Q92617 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB3Q92617 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.57□□□□□ -0.08
NPIPB3Q92617 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.57□□□□□ -0.08
NPIPB3Q92617 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB3Q92617 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NPIPB3Q92617 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB3Q92617 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB3Q92617 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.57□□□□□ -0.08
NPIPB3Q92617 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB3Q92617 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB3Q92617 MYLKP1-201ENST00000509077 1580 ntBASIC14.57□□□□□ -0.08
NPIPB3Q92617 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
NPIPB3Q92617 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB3Q92617 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB3Q92617 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
NPIPB3Q92617 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB3Q92617 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB3Q92617 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB3Q92617 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB3Q92617 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB3Q92617 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.57□□□□□ -0.08
NPIPB3Q92617 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB3Q92617 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB3Q92617 FDX2-207ENST00000494368 584 ntTSL 4 BASIC14.57□□□□□ -0.08
NPIPB3Q92617 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
NPIPB3Q92617 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.57□□□□□ -0.08
NPIPB3Q92617 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB3Q92617 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
NPIPB3Q92617 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB3Q92617 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB3Q92617 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB3Q92617 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB3Q92617 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.57□□□□□ -0.08
NPIPB3Q92617 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB3Q92617 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC14.57□□□□□ -0.08
NPIPB3Q92617 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB3Q92617 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
NPIPB3Q92617 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC14.57□□□□□ -0.08
NPIPB3Q92617 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.57□□□□□ -0.08
NPIPB3Q92617 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB3Q92617 AC093677.2-201ENST00000600169 1863 ntBASIC14.57□□□□□ -0.08
NPIPB3Q92617 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPB3Q92617 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPB3Q92617 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPB3Q92617 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.56□□□□□ -0.08
NPIPB3Q92617 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.56□□□□□ -0.08
NPIPB3Q92617 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NPIPB3Q92617 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NPIPB3Q92617 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.56□□□□□ -0.08
NPIPB3Q92617 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPB3Q92617 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.56□□□□□ -0.08
NPIPB3Q92617 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms