Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 AC099343.3-201ENST00000605834 2503 ntBASIC18.9■□□□□ 0.62
RTL3Q8N8U3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 AL359075.1-203ENST00000462729 1002 ntBASIC18.9■□□□□ 0.62
RTL3Q8N8U3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RTL3Q8N8U3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTL3Q8N8U3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
RTL3Q8N8U3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTL3Q8N8U3 AC009113.1-201ENST00000570267 2443 ntBASIC18.89■□□□□ 0.61
RTL3Q8N8U3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
RTL3Q8N8U3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTL3Q8N8U3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTL3Q8N8U3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTL3Q8N8U3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTL3Q8N8U3 PVRIG2P-201ENST00000435460 978 ntBASIC18.89■□□□□ 0.61
RTL3Q8N8U3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.89■□□□□ 0.61
RTL3Q8N8U3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.89■□□□□ 0.61
RTL3Q8N8U3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.89■□□□□ 0.61
RTL3Q8N8U3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.89■□□□□ 0.61
RTL3Q8N8U3 LINC01238-205ENST00000567549 1107 ntBASIC18.89■□□□□ 0.61
RTL3Q8N8U3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RTL3Q8N8U3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
RTL3Q8N8U3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.89■□□□□ 0.61
RTL3Q8N8U3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTL3Q8N8U3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.89■□□□□ 0.61
RTL3Q8N8U3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTL3Q8N8U3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.89■□□□□ 0.61
RTL3Q8N8U3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTL3Q8N8U3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.89■□□□□ 0.61
RTL3Q8N8U3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTL3Q8N8U3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RTL3Q8N8U3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.88■□□□□ 0.61
RTL3Q8N8U3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RTL3Q8N8U3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.88■□□□□ 0.61
RTL3Q8N8U3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RTL3Q8N8U3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTL3Q8N8U3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RTL3Q8N8U3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTL3Q8N8U3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTL3Q8N8U3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTL3Q8N8U3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTL3Q8N8U3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.88■□□□□ 0.61
RTL3Q8N8U3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RTL3Q8N8U3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RTL3Q8N8U3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.88■□□□□ 0.61
RTL3Q8N8U3 AL049597.2-201ENST00000565575 961 ntBASIC18.88■□□□□ 0.61
RTL3Q8N8U3 AC104581.1-202ENST00000635932 2618 ntBASIC18.88■□□□□ 0.61
RTL3Q8N8U3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.88■□□□□ 0.61
RTL3Q8N8U3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTL3Q8N8U3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTL3Q8N8U3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTL3Q8N8U3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.88■□□□□ 0.61
RTL3Q8N8U3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTL3Q8N8U3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RTL3Q8N8U3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTL3Q8N8U3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RTL3Q8N8U3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.88■□□□□ 0.61
RTL3Q8N8U3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RTL3Q8N8U3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.88■□□□□ 0.61
RTL3Q8N8U3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTL3Q8N8U3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RTL3Q8N8U3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTL3Q8N8U3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTL3Q8N8U3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTL3Q8N8U3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTL3Q8N8U3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTL3Q8N8U3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTL3Q8N8U3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTL3Q8N8U3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTL3Q8N8U3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
RTL3Q8N8U3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTL3Q8N8U3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RTL3Q8N8U3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
RTL3Q8N8U3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RTL3Q8N8U3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RTL3Q8N8U3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.87■□□□□ 0.61
RTL3Q8N8U3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms