Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
VPS52Q8N1B4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.98■□□□□ 0.79
VPS52Q8N1B4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VPS52Q8N1B4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS52Q8N1B4 TNXA-203ENST00000507684 2038 ntBASIC19.98■□□□□ 0.79
VPS52Q8N1B4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS52Q8N1B4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS52Q8N1B4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VPS52Q8N1B4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VPS52Q8N1B4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.97■□□□□ 0.79
VPS52Q8N1B4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 CHCHD2P8-201ENST00000429873 447 ntBASIC19.97■□□□□ 0.79
VPS52Q8N1B4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 AC111152.3-201ENST00000569699 673 ntBASIC19.97■□□□□ 0.79
VPS52Q8N1B4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 AL109659.2-201ENST00000606809 1674 ntBASIC19.97■□□□□ 0.79
VPS52Q8N1B4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.97■□□□□ 0.79
VPS52Q8N1B4 RCC2P3-201ENST00000418112 1537 ntBASIC19.97■□□□□ 0.79
VPS52Q8N1B4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.96■□□□□ 0.79
VPS52Q8N1B4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VPS52Q8N1B4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VPS52Q8N1B4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS52Q8N1B4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS52Q8N1B4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS52Q8N1B4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.96■□□□□ 0.79
VPS52Q8N1B4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.96■□□□□ 0.79
VPS52Q8N1B4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS52Q8N1B4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS52Q8N1B4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.96■□□□□ 0.79
VPS52Q8N1B4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.96■□□□□ 0.79
VPS52Q8N1B4 AL845331.1-201ENST00000424978 1190 ntBASIC19.96■□□□□ 0.79
VPS52Q8N1B4 TSPY22P-201ENST00000427496 604 ntBASIC19.96■□□□□ 0.79
VPS52Q8N1B4 AC246785.2-201ENST00000432512 513 ntBASIC19.96■□□□□ 0.79
VPS52Q8N1B4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.96■□□□□ 0.79
VPS52Q8N1B4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VPS52Q8N1B4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VPS52Q8N1B4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS52Q8N1B4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
VPS52Q8N1B4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS52Q8N1B4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.96■□□□□ 0.79
VPS52Q8N1B4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.95■□□□□ 0.79
VPS52Q8N1B4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VPS52Q8N1B4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS52Q8N1B4 AC008556.1-201ENST00000610908 2040 ntBASIC19.95■□□□□ 0.78
VPS52Q8N1B4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS52Q8N1B4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS52Q8N1B4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS52Q8N1B4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS52Q8N1B4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS52Q8N1B4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS52Q8N1B4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
VPS52Q8N1B4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS52Q8N1B4 KRT18P23-201ENST00000435622 1283 ntBASIC19.95■□□□□ 0.78
VPS52Q8N1B4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.95■□□□□ 0.78
VPS52Q8N1B4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.95■□□□□ 0.78
VPS52Q8N1B4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.95■□□□□ 0.78
VPS52Q8N1B4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.95■□□□□ 0.78
VPS52Q8N1B4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS52Q8N1B4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VPS52Q8N1B4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS52Q8N1B4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS52Q8N1B4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS52Q8N1B4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms