Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 WWOX-216ENST00000569818 525 ntBASIC17.3■□□□□ 0.36
CCDC71Q8IV32 AC087388.1-201ENST00000571370 1112 ntBASIC17.3■□□□□ 0.36
CCDC71Q8IV32 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 AC011298.2-201ENST00000617989 482 ntBASIC17.3■□□□□ 0.36
CCDC71Q8IV32 AC130371.2-201ENST00000619443 611 ntBASIC17.3■□□□□ 0.36
CCDC71Q8IV32 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 RCC2P6-201ENST00000526625 1557 ntBASIC17.3■□□□□ 0.36
CCDC71Q8IV32 AL162741.1-201ENST00000565563 1558 ntBASIC17.3■□□□□ 0.36
CCDC71Q8IV32 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.3■□□□□ 0.36
CCDC71Q8IV32 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 AC008040.2-201ENST00000461049 708 ntBASIC17.29■□□□□ 0.36
CCDC71Q8IV32 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 AC006011.2-201ENST00000621313 1158 ntBASIC17.29■□□□□ 0.36
CCDC71Q8IV32 HLA-A-209ENST00000638375 975 ntBASIC17.29■□□□□ 0.36
CCDC71Q8IV32 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCDC71Q8IV32 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms