Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 YWHAZ-214ENST00000517727 876 ntTSL 312.52□□□□□ -0.414e-8■□□□□ 10.8
SND1Q7KZF4 YWHAZ-212ENST00000480304 2247 ntTSL 212.32□□□□□ -0.444e-8■□□□□ 10.8
SND1Q7KZF4 LAMA5-209ENST00000481120 386 ntTSL 223.62■■□□□ 1.372e-14■□□□□ 10.8
SND1Q7KZF4 GYPA-210ENST00000514603 613 ntTSL 58.04□□□□□ -1.123e-7■□□□□ 10.8
SND1Q7KZF4 FDFT1-220ENST00000531733 712 ntTSL 221.69■■□□□ 1.062e-10■□□□□ 10.8
SND1Q7KZF4 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.78■□□□□ 0.287e-7■□□□□ 10.8
SND1Q7KZF4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.257e-7■□□□□ 10.8
SND1Q7KZF4 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.94■□□□□ 0.147e-7■□□□□ 10.8
SND1Q7KZF4 STIP1-204ENST00000536973 738 ntTSL 513.49□□□□□ -0.257e-7■□□□□ 10.8
SND1Q7KZF4 GRN-203ENST00000585512 562 ntTSL 416.55■□□□□ 0.244e-13■□□□□ 10.8
SND1Q7KZF4 GRN-207ENST00000587109 535 ntTSL 216.28■□□□□ 0.24e-13■□□□□ 10.8
SND1Q7KZF4 GLMP-205ENST00000476177 795 ntTSL 518.15■□□□□ 0.55e-7■□□□□ 10.8
SND1Q7KZF4 CLN3-232ENST00000568443 969 ntTSL 323.17■■□□□ 1.35e-7■□□□□ 10.8
SND1Q7KZF4 CNPY2-210ENST00000551720 586 ntTSL 320.16■□□□□ 0.825e-7■□□□□ 10.8
SND1Q7KZF4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.172e-7■□□□□ 10.8
SND1Q7KZF4 SF3A3-203ENST00000461869 776 ntTSL 315.9■□□□□ 0.142e-7■□□□□ 10.8
SND1Q7KZF4 ETFB-205ENST00000596253 575 ntTSL 315.47■□□□□ 0.072e-7■□□□□ 10.8
SND1Q7KZF4 ETFB-202ENST00000354232 3551 ntTSL 1 (best) BASIC10.85□□□□□ -0.672e-7■□□□□ 10.8
SND1Q7KZF4 SF3A3-201ENST00000373019 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.692e-7■□□□□ 10.8
SND1Q7KZF4 SF3A3-204ENST00000462258 527 ntTSL 210.49□□□□□ -0.732e-7■□□□□ 10.8
SND1Q7KZF4 EIF2S1-205ENST00000556724 527 ntTSL 29.18□□□□□ -0.945e-7■□□□□ 10.8
SND1Q7KZF4 XRCC6-208ENST00000478914 550 ntTSL 29.03□□□□□ -0.965e-7■□□□□ 10.8
SND1Q7KZF4 CLTC-204ENST00000472129 654 ntTSL 28.51□□□□□ -1.055e-17■□□□□ 10.8
SND1Q7KZF4 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.115e-7■□□□□ 10.8
SND1Q7KZF4 SF3A3-205ENST00000470585 704 ntTSL 37.09□□□□□ -1.272e-7■□□□□ 10.8
SND1Q7KZF4 SLC30A6-208ENST00000454324 2359 ntTSL 26.87□□□□□ -1.315e-7■□□□□ 10.8
SND1Q7KZF4 SF3A3-208ENST00000489537 891 ntTSL 46.68□□□□□ -1.342e-7■□□□□ 10.8
SND1Q7KZF4 SLC30A6-207ENST00000449777 2207 ntTSL 26.54□□□□□ -1.365e-7■□□□□ 10.8
SND1Q7KZF4 GSPT1-207ENST00000564790 491 ntTSL 35.61□□□□□ -1.515e-7■□□□□ 10.8
SND1Q7KZF4 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.89□□□□□ -1.635e-7■□□□□ 10.8
SND1Q7KZF4 GSPT1-205ENST00000562794 501 ntTSL 34.82□□□□□ -1.645e-7■□□□□ 10.8
SND1Q7KZF4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.82□□□□□ -1.645e-7■□□□□ 10.8
SND1Q7KZF4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.31□□□□□ -1.725e-7■□□□□ 10.8
SND1Q7KZF4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.33□□□□□ -1.885e-7■□□□□ 10.8
SND1Q7KZF4 YWHAZ-221ENST00000523131 567 ntTSL 521.28■■□□□ 19e-8■□□□□ 10.8
SND1Q7KZF4 YWHAZ-208ENST00000418997 996 ntTSL 220.83■□□□□ 0.939e-8■□□□□ 10.8
SND1Q7KZF4 YWHAZ-223ENST00000523938 626 ntTSL 520.75■□□□□ 0.919e-8■□□□□ 10.8
SND1Q7KZF4 YWHAZ-210ENST00000437293 701 ntTSL 319.78■□□□□ 0.769e-8■□□□□ 10.8
SND1Q7KZF4 YWHAZ-217ENST00000521328 511 ntTSL 510.61□□□□□ -0.719e-8■□□□□ 10.8
SND1Q7KZF4 TMED2-202ENST00000438031 603 ntTSL 427.08■■□□□ 1.931e-6■□□□□ 10.7
SND1Q7KZF4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.551e-6■□□□□ 10.7
SND1Q7KZF4 TMED2-204ENST00000543425 1350 ntTSL 314.06□□□□□ -0.161e-6■□□□□ 10.7
SND1Q7KZF4 TMED2-205ENST00000544188 433 ntTSL 212.19□□□□□ -0.461e-6■□□□□ 10.7
SND1Q7KZF4 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC10.78□□□□□ -0.681e-6■□□□□ 10.7
SND1Q7KZF4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.791e-6■□□□□ 10.7
SND1Q7KZF4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.3■□□□□ 0.521e-6■□□□□ 10.7
SND1Q7KZF4 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.161e-6■□□□□ 10.7
SND1Q7KZF4 FAM234A-201ENST00000301678 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.291e-6■□□□□ 10.7
SND1Q7KZF4 P3H4-204ENST00000467164 723 ntTSL 1 (best)17.01■□□□□ 0.313e-8■□□□□ 10.7
SND1Q7KZF4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.436e-13■□□□□ 10.7
SND1Q7KZF4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.57■□□□□ 0.46e-13■□□□□ 10.7
SND1Q7KZF4 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.56■□□□□ 0.086e-13■□□□□ 10.7
SND1Q7KZF4 MPP1-208ENST00000439370 2066 ntTSL 512.94□□□□□ -0.346e-13■□□□□ 10.7
SND1Q7KZF4 MPP1-216ENST00000491955 2378 ntTSL 26.75□□□□□ -1.336e-13■□□□□ 10.7
SND1Q7KZF4 RELN-204ENST00000429186 891 ntTSL 58.74□□□□□ -1.018e-40■□□□□ 10.7
SND1Q7KZF4 HMGCR-203ENST00000442032 268 ntTSL 313.72□□□□□ -0.218e-10■□□□□ 10.7
SND1Q7KZF4 PSMA5-202ENST00000477897 275 ntTSL 24.9□□□□□ -1.632e-10■□□□□ 10.7
SND1Q7KZF4 COPA-205ENST00000541366 616 ntTSL 212.24□□□□□ -0.454e-7■□□□□ 10.7
SND1Q7KZF4 ATP5A1-208ENST00000589252 662 ntTSL 520.06■□□□□ 0.81e-8■□□□□ 10.7
SND1Q7KZF4 NDUFS5-201ENST00000372967 544 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.251e-18■□□□□ 10.7
SND1Q7KZF4 NDUFS5-202ENST00000372969 548 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.251e-18■□□□□ 10.7
SND1Q7KZF4 GLMP-202ENST00000368264 837 ntTSL 315.61■□□□□ 0.096e-7■□□□□ 10.7
SND1Q7KZF4 GLMP-206ENST00000479084 906 ntTSL 215.49■□□□□ 0.076e-7■□□□□ 10.7
SND1Q7KZF4 GLMP-212ENST00000497955 1002 ntTSL 213.05□□□□□ -0.326e-7■□□□□ 10.7
SND1Q7KZF4 ALDOC-209ENST00000584086 686 ntTSL 314.68□□□□□ -0.061e-7■□□□□ 10.7
SND1Q7KZF4 ALDOC-205ENST00000460201 922 ntTSL 214.57□□□□□ -0.081e-7■□□□□ 10.7
SND1Q7KZF4 ALDOC-207ENST00000581807 580 ntTSL 312.45□□□□□ -0.421e-7■□□□□ 10.7
SND1Q7KZF4 ALDOC-204ENST00000435638 579 ntTSL 310.24□□□□□ -0.771e-7■□□□□ 10.7
SND1Q7KZF4 BLVRB-203ENST00000597870 1392 ntTSL 519.32■□□□□ 0.683e-7■□□□□ 10.7
SND1Q7KZF4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.13e-7■□□□□ 10.7
SND1Q7KZF4 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC13.79□□□□□ -0.23e-7■□□□□ 10.7
SND1Q7KZF4 BLVRB-204ENST00000601346 676 ntTSL 212.83□□□□□ -0.363e-7■□□□□ 10.7
SND1Q7KZF4 FGFR4-211ENST00000509511 1341 ntTSL 1 (best)20.43■□□□□ 0.868e-11■□□□□ 10.7
SND1Q7KZF4 FGFR4-210ENST00000508139 720 ntTSL 517.85■□□□□ 0.458e-11■□□□□ 10.7
SND1Q7KZF4 GARS-209ENST00000496643 772 ntTSL 25.68□□□□□ -1.53e-13■□□□□ 10.7
SND1Q7KZF4 LDHB-202ENST00000396075 744 ntTSL 38.76□□□□□ -1.011e-10■□□□□ 10.7
SND1Q7KZF4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.37■■□□□ 1.332e-7■□□□□ 10.7
SND1Q7KZF4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.8■□□□□ 0.922e-7■□□□□ 10.7
SND1Q7KZF4 CRKL-202ENST00000411769 2037 ntTSL 1 (best)20.58■□□□□ 0.885e-9■□□□□ 10.7
SND1Q7KZF4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.862e-7■□□□□ 10.7
SND1Q7KZF4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.792e-7■□□□□ 10.7
SND1Q7KZF4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.765e-9■□□□□ 10.7
SND1Q7KZF4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.642e-6■□□□□ 10.7
SND1Q7KZF4 TMC6-224ENST00000593044 3070 ntTSL 217.66■□□□□ 0.422e-7■□□□□ 10.7
SND1Q7KZF4 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.392e-7■□□□□ 10.7
SND1Q7KZF4 TMC6-222ENST00000592076 693 ntTSL 316.86■□□□□ 0.292e-7■□□□□ 10.7
SND1Q7KZF4 NONO-203ENST00000373856 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.285e-9■□□□□ 10.7
SND1Q7KZF4 NONO-202ENST00000373841 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.415e-9■□□□□ 10.7
SND1Q7KZF4 CDK6-201ENST00000265734 11612 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.565e-15■□□□□ 10.7
SND1Q7KZF4 NONO-215ENST00000535149 2882 ntTSL 2 BASIC11.23□□□□□ -0.615e-9■□□□□ 10.7
SND1Q7KZF4 NONO-201ENST00000276079 2713 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.675e-9■□□□□ 10.7
SND1Q7KZF4 NONO-205ENST00000418921 703 ntTSL 59.73□□□□□ -0.855e-9■□□□□ 10.7
SND1Q7KZF4 NONO-214ENST00000490044 3215 ntTSL 29.57□□□□□ -0.885e-9■□□□□ 10.7
SND1Q7KZF4 MAD2L1-205ENST00000512484 626 ntTSL 28.67□□□□□ -1.027e-6■□□□□ 10.7
SND1Q7KZF4 NONO-212ENST00000474431 644 ntTSL 58.33□□□□□ -1.085e-9■□□□□ 10.7
SND1Q7KZF4 NONO-204ENST00000413858 855 ntTSL 38.26□□□□□ -1.095e-9■□□□□ 10.7
SND1Q7KZF4 CDK6-203ENST00000467166 779 ntTSL 27.5□□□□□ -1.215e-15■□□□□ 10.7
SND1Q7KZF4 NONO-209ENST00000471419 846 ntTSL 27.05□□□□□ -1.285e-9■□□□□ 10.7
SND1Q7KZF4 NONO-210ENST00000472185 397 ntTSL 56.89□□□□□ -1.315e-9■□□□□ 10.7
SND1Q7KZF4 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.63e-6■□□□□ 10.7
Retrieved 100 of 13,567 protein–RNA pairs in 69.9 ms