RNA–Protein interactions for RNA: ENST00000496643.1

GARS-209, Transcript of glycyl-tRNA synthetase, humanhuman

TSL 2

Gene GARS, Length 772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARS-209ENST00000496643 AEBP2Q6ZN18 517 aaPredicted RBP23.33■■□□□ 1.33
GARS-209ENST00000496643 CHIC1Q5VXU3 224 aa22.17■■□□□ 1.14
GARS-209ENST00000496643 SENP3Q9H4L4 574 aaPredicted RBP19.82■□□□□ 0.76
GARS-209ENST00000496643 PHF23Q9BUL5 403 aaPredicted RBP19.57■□□□□ 0.72
GARS-209ENST00000496643 FOXD1Q16676 465 aa18.5■□□□□ 0.55
GARS-209ENST00000496643 PLPPR3Q6T4P5 718 aa17.7■□□□□ 0.42
GARS-209ENST00000496643 PPP6R1Q9UPN7 881 aa17.36■□□□□ 0.37
GARS-209ENST00000496643 ADRA2BP18089 450 aa17.27■□□□□ 0.36
GARS-209ENST00000496643 PIAS4Q8N2W9 510 aaPredicted RBP17.27■□□□□ 0.36
GARS-209ENST00000496643 MSH5O43196 834 aa17.24■□□□□ 0.35
GARS-209ENST00000496643 POTEDQ86YR6 584 aa16.78■□□□□ 0.28
GARS-209ENST00000496643 MAPK8IP2Q13387 824 aaPredicted RBP15.85■□□□□ 0.13
GARS-209ENST00000496643 DMRT2Q9Y5R5 561 aa15.75■□□□□ 0.11
GARS-209ENST00000496643 SCAF1Q9H7N4 1312 aaKnown RBP15.71■□□□□ 0.11
GARS-209ENST00000496643 PPP4R3CPQ6ZMV5 832 aa15.53■□□□□ 0.08
GARS-209ENST00000496643 CNKSR2Q8WXI2 1034 aa15.22■□□□□ 0.03
GARS-209ENST00000496643 HOXD11P31277 338 aaPredicted RBP15.21■□□□□ 0.03
GARS-209ENST00000496643 RNF216Q9NWF9 866 aaPredicted RBP15.08■□□□□ 0
GARS-209ENST00000496643 DCAF8L1A6NGE4 600 aa15□□□□□ -0.01
GARS-209ENST00000496643 NCBP3Q53F19 620 aaKnown RBP14.88□□□□□ -0.03
GARS-209ENST00000496643 NPM3O75607 178 aaKnown RBP14.76□□□□□ -0.05
GARS-209ENST00000496643 RNF39Q9H2S5 420 aa14.76□□□□□ -0.05
GARS-209ENST00000496643 CACNB1Q02641 598 aaPredicted RBP14.73□□□□□ -0.05
GARS-209ENST00000496643 DNAJC5BQ9UF47 199 aa14.66□□□□□ -0.06
GARS-209ENST00000496643 KCNA4P22459 653 aa14.53□□□□□ -0.08
GARS-209ENST00000496643 C1QBPQ07021 282 aaKnown RBP14.51□□□□□ -0.09
GARS-209ENST00000496643 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.4□□□□□ -0.1
GARS-209ENST00000496643 U3KPZ7 1027 aaPredicted RBP14.2□□□□□ -0.14
GARS-209ENST00000496643 SLC4A2P04920 1241 aa14.11□□□□□ -0.15
GARS-209ENST00000496643 SPINK5Q9NQ38 1064 aaPredicted RBP13.96□□□□□ -0.17
GARS-209ENST00000496643 CAPN15O75808 1086 aa13.86□□□□□ -0.19
GARS-209ENST00000496643 DSG3P32926 999 aa13.84□□□□□ -0.19
GARS-209ENST00000496643 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.71□□□□□ -0.21
GARS-209ENST00000496643 HNRNPUL2Q1KMD3 747 aaKnown RBP13.71□□□□□ -0.21
GARS-209ENST00000496643 APLP2Q06481 763 aa13.68□□□□□ -0.22
GARS-209ENST00000496643 SLC4A1APQ9BWU0 796 aaKnown RBP13.68□□□□□ -0.22
GARS-209ENST00000496643 SAMD1Q6SPF0 538 aaPredicted RBP13.66□□□□□ -0.22
GARS-209ENST00000496643 TRHP20396 242 aaPredicted RBP13.65□□□□□ -0.22
GARS-209ENST00000496643 ZNF219Q9P2Y4 722 aaPredicted RBP13.65□□□□□ -0.22
GARS-209ENST00000496643 MYCNP04198 464 aaPredicted RBP13.62□□□□□ -0.23
GARS-209ENST00000496643 ABCB7O75027 752 aa13.58□□□□□ -0.24
GARS-209ENST00000496643 FOXD4L1Q9NU39 408 aa13.52□□□□□ -0.25
GARS-209ENST00000496643 ZBTB22O15209 634 aa13.41□□□□□ -0.26
GARS-209ENST00000496643 ATF5Q9Y2D1 282 aaPredicted RBP13.36□□□□□ -0.27
GARS-209ENST00000496643 POLA2Q14181 598 aa13.32□□□□□ -0.28
GARS-209ENST00000496643 POTEHQ6S545 545 aa13.14□□□□□ -0.31
GARS-209ENST00000496643 RBM42Q9BTD8 480 aaKnown RBP13.14□□□□□ -0.31
GARS-209ENST00000496643 ATXN8OSP0DMR3 200 aa13.08□□□□□ -0.32
GARS-209ENST00000496643 ZBTB12Q9Y330 459 aaPredicted RBP13.03□□□□□ -0.32
GARS-209ENST00000496643 NISCHQ9Y2I1 1504 aa13.03□□□□□ -0.32
GARS-209ENST00000496643 OSCARQ8IYS5 282 aa12.94□□□□□ -0.34
GARS-209ENST00000496643 CHRDL2Q6WN34 429 aa12.87□□□□□ -0.35
GARS-209ENST00000496643 AKT1S1Q96B36 256 aa12.87□□□□□ -0.35
GARS-209ENST00000496643 CSRNP3Q8WYN3 585 aa12.8□□□□□ -0.36
GARS-209ENST00000496643 REM2Q8IYK8 340 aaPredicted RBP12.77□□□□□ -0.37
GARS-209ENST00000496643 MKRN4PQ13434 485 aaPredicted RBP12.75□□□□□ -0.37
GARS-209ENST00000496643 FBLN2P98095 1184 aa12.72□□□□□ -0.37
GARS-209ENST00000496643 SPDYE2BA6NHP3 402 aa12.67□□□□□ -0.38
GARS-209ENST00000496643 SPDYE6P0CI01 402 aa12.67□□□□□ -0.38
GARS-209ENST00000496643 SPDYE2Q495Y8 402 aa12.67□□□□□ -0.38
GARS-209ENST00000496643 PITPNM1O00562 1244 aa12.66□□□□□ -0.38
GARS-209ENST00000496643 EHMT2Q96KQ7 1210 aa12.61□□□□□ -0.39
GARS-209ENST00000496643 PIP4P2Q8N4L2 257 aa12.59□□□□□ -0.39
GARS-209ENST00000496643 SSUH2Q9Y2M2 353 aa12.56□□□□□ -0.4
GARS-209ENST00000496643 FXR2P51116 673 aaKnown RBP eCLIP12.53□□□□□ -0.46e-11■■□□□ 13.2
GARS-209ENST00000496643 ZNF692Q9BU19 519 aaPredicted RBP12.49□□□□□ -0.41
GARS-209ENST00000496643 SPDYE1Q8NFV5 336 aaPredicted RBP12.41□□□□□ -0.42
GARS-209ENST00000496643 CLEC11AQ9Y240 323 aa12.36□□□□□ -0.43
GARS-209ENST00000496643 SP7Q8TDD2 431 aaPredicted RBP12.35□□□□□ -0.43
GARS-209ENST00000496643 PABPN1Q86U42 306 aaKnown RBP eCLIP12.34□□□□□ -0.43
GARS-209ENST00000496643 PRKAR2AP13861 404 aaKnown RBP12.29□□□□□ -0.44
GARS-209ENST00000496643 HAX1O00165 279 aa12.28□□□□□ -0.44
GARS-209ENST00000496643 EVX2Q03828 476 aa12.23□□□□□ -0.45
GARS-209ENST00000496643 CHADLQ6NUI6 762 aa12.18□□□□□ -0.46
GARS-209ENST00000496643 PRR29P0C7W0 189 aa12.17□□□□□ -0.46
GARS-209ENST00000496643 C19orf67A6NJJ6 358 aa12.13□□□□□ -0.47
GARS-209ENST00000496643 SPDYE4A6NLX3 237 aa12.1□□□□□ -0.47
GARS-209ENST00000496643 FARP1Q9Y4F1 1045 aaPredicted RBP12□□□□□ -0.49
GARS-209ENST00000496643 STAG3Q9UJ98 1225 aa11.96□□□□□ -0.49
GARS-209ENST00000496643 CREBZFQ9NS37 354 aa11.95□□□□□ -0.5
GARS-209ENST00000496643 PROM2Q8N271 834 aa11.92□□□□□ -0.5
GARS-209ENST00000496643 GABBR2O75899 941 aa11.91□□□□□ -0.5
GARS-209ENST00000496643 CD44P16070 742 aaKnown RBP11.9□□□□□ -0.5
GARS-209ENST00000496643 MNX1P50219 401 aaPredicted RBP11.8□□□□□ -0.52
GARS-209ENST00000496643 ZNF579Q8NAF0 562 aaKnown RBP11.75□□□□□ -0.53
GARS-209ENST00000496643 ZRANB1Q9UGI0 708 aa11.72□□□□□ -0.53
GARS-209ENST00000496643 POTEIP0CG38 1075 aa11.71□□□□□ -0.53
GARS-209ENST00000496643 CLCN6P51797 869 aa11.69□□□□□ -0.54
GARS-209ENST00000496643 CCDC180Q9P1Z9 1646 aa11.64□□□□□ -0.55
GARS-209ENST00000496643 NPM1P06748 294 aaKnown RBP eCLIP11.64□□□□□ -0.55
GARS-209ENST00000496643 GALR2O43603 387 aaPredicted RBP11.61□□□□□ -0.55
GARS-209ENST00000496643 PHF12Q96QT6 1004 aa11.61□□□□□ -0.55
GARS-209ENST00000496643 PAK3O75914 559 aaPredicted RBP11.59□□□□□ -0.55
GARS-209ENST00000496643 FKBP8Q14318 412 aa11.56□□□□□ -0.56
GARS-209ENST00000496643 LHX8Q68G74 356 aa11.56□□□□□ -0.56
GARS-209ENST00000496643 DCBLD2Q96PD2 775 aa11.54□□□□□ -0.56
GARS-209ENST00000496643 MIER1Q8N108 512 aa11.49□□□□□ -0.57
GARS-209ENST00000496643 CCDC61Q9Y6R9 512 aa11.48□□□□□ -0.57
GARS-209ENST00000496643 MS4A3Q96HJ5 214 aa11.47□□□□□ -0.57
GARS-209ENST00000496643 TSPYL2Q9H2G4 693 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms