RNA–Protein interactions for RNA: ENST00000472129.3

CLTC-204, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-204ENST00000472129 AEBP2Q6ZN18 517 aaPredicted RBP28.61■■■□□ 2.17
CLTC-204ENST00000472129 CHIC1Q5VXU3 224 aa27.02■■□□□ 1.92
CLTC-204ENST00000472129 SENP3Q9H4L4 574 aaPredicted RBP24.35■■□□□ 1.49
CLTC-204ENST00000472129 PHF23Q9BUL5 403 aaPredicted RBP24.04■■□□□ 1.44
CLTC-204ENST00000472129 FOXD1Q16676 465 aa22.75■■□□□ 1.23
CLTC-204ENST00000472129 PLPPR3Q6T4P5 718 aa21.51■■□□□ 1.03
CLTC-204ENST00000472129 MSH5O43196 834 aa21.27■■□□□ 1
CLTC-204ENST00000472129 PIAS4Q8N2W9 510 aaPredicted RBP21.21■□□□□ 0.99
CLTC-204ENST00000472129 PPP6R1Q9UPN7 881 aa21.21■□□□□ 0.99
CLTC-204ENST00000472129 ADRA2BP18089 450 aa21.12■□□□□ 0.97
CLTC-204ENST00000472129 POTEDQ86YR6 584 aa20.99■□□□□ 0.95
CLTC-204ENST00000472129 MAPK8IP2Q13387 824 aaPredicted RBP19.45■□□□□ 0.7
CLTC-204ENST00000472129 DMRT2Q9Y5R5 561 aa19.31■□□□□ 0.68
CLTC-204ENST00000472129 SCAF1Q9H7N4 1312 aaKnown RBP19.25■□□□□ 0.67
CLTC-204ENST00000472129 PPP4R3CPQ6ZMV5 832 aa18.86■□□□□ 0.61
CLTC-204ENST00000472129 HOXD11P31277 338 aaPredicted RBP18.56■□□□□ 0.56
CLTC-204ENST00000472129 CNKSR2Q8WXI2 1034 aa18.51■□□□□ 0.55
CLTC-204ENST00000472129 DCAF8L1A6NGE4 600 aa18.5■□□□□ 0.55
CLTC-204ENST00000472129 RNF216Q9NWF9 866 aaPredicted RBP18.38■□□□□ 0.53
CLTC-204ENST00000472129 CACNB1Q02641 598 aaPredicted RBP18.33■□□□□ 0.52
CLTC-204ENST00000472129 KCNA4P22459 653 aa18.29■□□□□ 0.52
CLTC-204ENST00000472129 NCBP3Q53F19 620 aaKnown RBP18.23■□□□□ 0.51
CLTC-204ENST00000472129 RNF39Q9H2S5 420 aa18.18■□□□□ 0.5
CLTC-204ENST00000472129 NPM3O75607 178 aaKnown RBP18.05■□□□□ 0.48
CLTC-204ENST00000472129 DNAJC5BQ9UF47 199 aa17.9■□□□□ 0.46
CLTC-204ENST00000472129 C1QBPQ07021 282 aaKnown RBP17.88■□□□□ 0.45
CLTC-204ENST00000472129 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.66■□□□□ 0.425e-6■□□□□ 8.1
CLTC-204ENST00000472129 SLC4A1APQ9BWU0 796 aaKnown RBP17.35■□□□□ 0.37
CLTC-204ENST00000472129 U3KPZ7 1027 aaPredicted RBP17.32■□□□□ 0.36
CLTC-204ENST00000472129 SPINK5Q9NQ38 1064 aaPredicted RBP17.11■□□□□ 0.33
CLTC-204ENST00000472129 SLC4A2P04920 1241 aa17.1■□□□□ 0.33
CLTC-204ENST00000472129 CAPN15O75808 1086 aa17.04■□□□□ 0.32
CLTC-204ENST00000472129 DSG3P32926 999 aa16.99■□□□□ 0.31
CLTC-204ENST00000472129 ZBTB22O15209 634 aa16.87■□□□□ 0.29
CLTC-204ENST00000472129 FOXD4L1Q9NU39 408 aa16.81■□□□□ 0.28
CLTC-204ENST00000472129 EHMT2Q96KQ7 1210 aa16.77■□□□□ 0.28
CLTC-204ENST00000472129 TRHP20396 242 aaPredicted RBP16.76■□□□□ 0.27
CLTC-204ENST00000472129 APLP2Q06481 763 aa16.73■□□□□ 0.27
CLTC-204ENST00000472129 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.71■□□□□ 0.27
CLTC-204ENST00000472129 HNRNPUL2Q1KMD3 747 aaKnown RBP16.71■□□□□ 0.27
CLTC-204ENST00000472129 ZNF219Q9P2Y4 722 aaPredicted RBP16.69■□□□□ 0.26
CLTC-204ENST00000472129 ABCB7O75027 752 aa16.67■□□□□ 0.26
CLTC-204ENST00000472129 SAMD1Q6SPF0 538 aaPredicted RBP16.64■□□□□ 0.25
CLTC-204ENST00000472129 CSRNP3Q8WYN3 585 aa16.63■□□□□ 0.25
CLTC-204ENST00000472129 MYCNP04198 464 aaPredicted RBP16.62■□□□□ 0.25
CLTC-204ENST00000472129 POTEHQ6S545 545 aa16.42■□□□□ 0.22
CLTC-204ENST00000472129 ATF5Q9Y2D1 282 aaPredicted RBP16.3■□□□□ 0.2
CLTC-204ENST00000472129 POLA2Q14181 598 aa16.28■□□□□ 0.2
CLTC-204ENST00000472129 ATXN8OSP0DMR3 200 aa16.19■□□□□ 0.18
CLTC-204ENST00000472129 RBM42Q9BTD8 480 aaKnown RBP16.17■□□□□ 0.18
CLTC-204ENST00000472129 CHRDL2Q6WN34 429 aa15.89■□□□□ 0.13
CLTC-204ENST00000472129 ZBTB12Q9Y330 459 aaPredicted RBP15.89■□□□□ 0.13
CLTC-204ENST00000472129 OSCARQ8IYS5 282 aa15.79■□□□□ 0.12
CLTC-204ENST00000472129 AKT1S1Q96B36 256 aa15.79■□□□□ 0.12
CLTC-204ENST00000472129 REM2Q8IYK8 340 aaPredicted RBP15.67■□□□□ 0.1
CLTC-204ENST00000472129 MKRN4PQ13434 485 aaPredicted RBP15.56■□□□□ 0.08
CLTC-204ENST00000472129 PITPNM1O00562 1244 aa15.51■□□□□ 0.07
CLTC-204ENST00000472129 FBLN2P98095 1184 aa15.5■□□□□ 0.07
CLTC-204ENST00000472129 PIP4P2Q8N4L2 257 aa15.5■□□□□ 0.07
CLTC-204ENST00000472129 SPDYE2BA6NHP3 402 aa15.42■□□□□ 0.06
CLTC-204ENST00000472129 SPDYE6P0CI01 402 aa15.42■□□□□ 0.06
CLTC-204ENST00000472129 SPDYE2Q495Y8 402 aa15.42■□□□□ 0.06
CLTC-204ENST00000472129 FXR2P51116 673 aaKnown RBP eCLIP15.39■□□□□ 0.052e-8■■■□□ 16.7
CLTC-204ENST00000472129 SP7Q8TDD2 431 aaPredicted RBP15.34■□□□□ 0.05
CLTC-204ENST00000472129 SSUH2Q9Y2M2 353 aa15.24■□□□□ 0.03
CLTC-204ENST00000472129 HAX1O00165 279 aa15.23■□□□□ 0.03
CLTC-204ENST00000472129 ZNF692Q9BU19 519 aaPredicted RBP15.23■□□□□ 0.03
CLTC-204ENST00000472129 SPDYE1Q8NFV5 336 aaPredicted RBP15.18■□□□□ 0.02
CLTC-204ENST00000472129 CLEC11AQ9Y240 323 aa15.17■□□□□ 0.02
CLTC-204ENST00000472129 SPDYE4A6NLX3 237 aa15.1■□□□□ 0.01
CLTC-204ENST00000472129 PRKAR2AP13861 404 aaKnown RBP15.1■□□□□ 0.01
CLTC-204ENST00000472129 EVX2Q03828 476 aa15.09■□□□□ 0.01
CLTC-204ENST00000472129 FKBP8Q14318 412 aa15.02■□□□□ -0
CLTC-204ENST00000472129 PABPN1Q86U42 306 aaKnown RBP eCLIP15.02■□□□□ -0
CLTC-204ENST00000472129 CHADLQ6NUI6 762 aa14.92□□□□□ -0.02
CLTC-204ENST00000472129 C19orf67A6NJJ6 358 aa14.9□□□□□ -0.02
CLTC-204ENST00000472129 PRR29P0C7W0 189 aa14.89□□□□□ -0.03
CLTC-204ENST00000472129 PROM2Q8N271 834 aa14.82□□□□□ -0.04
CLTC-204ENST00000472129 GABBR2O75899 941 aa14.7□□□□□ -0.06
CLTC-204ENST00000472129 FARP1Q9Y4F1 1045 aaPredicted RBP14.67□□□□□ -0.06
CLTC-204ENST00000472129 STAG3Q9UJ98 1225 aa14.61□□□□□ -0.07
CLTC-204ENST00000472129 CD44P16070 742 aaKnown RBP14.6□□□□□ -0.07
CLTC-204ENST00000472129 CREBZFQ9NS37 354 aa14.54□□□□□ -0.08
CLTC-204ENST00000472129 FBXO3Q9UK99 471 aa14.44□□□□□ -0.1
CLTC-204ENST00000472129 POTEIP0CG38 1075 aa14.43□□□□□ -0.1
CLTC-204ENST00000472129 LHX8Q68G74 356 aa14.38□□□□□ -0.11
CLTC-204ENST00000472129 ZNF579Q8NAF0 562 aaKnown RBP14.38□□□□□ -0.11
CLTC-204ENST00000472129 ZRANB1Q9UGI0 708 aa14.38□□□□□ -0.11
CLTC-204ENST00000472129 CLCN6P51797 869 aa14.37□□□□□ -0.11
CLTC-204ENST00000472129 MIER1Q8N108 512 aa14.35□□□□□ -0.11
CLTC-204ENST00000472129 VASPP50552 380 aaPredicted RBP14.3□□□□□ -0.12
CLTC-204ENST00000472129 MNX1P50219 401 aaPredicted RBP14.29□□□□□ -0.12
CLTC-204ENST00000472129 PLCD3Q8N3E9 789 aa14.29□□□□□ -0.12
CLTC-204ENST00000472129 DCBLD2Q96PD2 775 aa14.26□□□□□ -0.13
CLTC-204ENST00000472129 GALR2O43603 387 aaPredicted RBP14.24□□□□□ -0.13
CLTC-204ENST00000472129 PAK3O75914 559 aaPredicted RBP14.2□□□□□ -0.14
CLTC-204ENST00000472129 NPM1P06748 294 aaKnown RBP eCLIP14.2□□□□□ -0.14
CLTC-204ENST00000472129 PHF12Q96QT6 1004 aa14.2□□□□□ -0.14
CLTC-204ENST00000472129 PLEKHG5O94827 1062 aa14.19□□□□□ -0.14
CLTC-204ENST00000472129 IFNLR1Q8IU57 520 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms