RNA–Protein interactions for RNA: ENST00000514603.1

GYPA-210, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 5

Gene GYPA, Length 613 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-210ENST00000514603 AEBP2Q6ZN18 517 aaPredicted RBP23.01■■□□□ 1.27
GYPA-210ENST00000514603 CHIC1Q5VXU3 224 aa22.58■■□□□ 1.21
GYPA-210ENST00000514603 PHF23Q9BUL5 403 aaPredicted RBP19.89■□□□□ 0.77
GYPA-210ENST00000514603 SENP3Q9H4L4 574 aaPredicted RBP19.47■□□□□ 0.71
GYPA-210ENST00000514603 POTEDQ86YR6 584 aa18.99■□□□□ 0.63
GYPA-210ENST00000514603 PLPPR3Q6T4P5 718 aa18.39■□□□□ 0.53
GYPA-210ENST00000514603 FOXD1Q16676 465 aa18.21■□□□□ 0.51
GYPA-210ENST00000514603 ADRA2BP18089 450 aa17.51■□□□□ 0.39
GYPA-210ENST00000514603 PPP6R1Q9UPN7 881 aa17.51■□□□□ 0.39
GYPA-210ENST00000514603 MSH5O43196 834 aa17.42■□□□□ 0.38
GYPA-210ENST00000514603 PIAS4Q8N2W9 510 aaPredicted RBP17.09■□□□□ 0.33
GYPA-210ENST00000514603 PPP4R3CPQ6ZMV5 832 aa16.23■□□□□ 0.19
GYPA-210ENST00000514603 KCNA4P22459 653 aa16.04■□□□□ 0.16
GYPA-210ENST00000514603 SCAF1Q9H7N4 1312 aaKnown RBP15.96■□□□□ 0.15
GYPA-210ENST00000514603 MAPK8IP2Q13387 824 aaPredicted RBP15.85■□□□□ 0.13
GYPA-210ENST00000514603 NCBP3Q53F19 620 aaKnown RBP15.82■□□□□ 0.12
GYPA-210ENST00000514603 CNKSR2Q8WXI2 1034 aa15.73■□□□□ 0.11
GYPA-210ENST00000514603 CACNB1Q02641 598 aaPredicted RBP15.68■□□□□ 0.1
GYPA-210ENST00000514603 NPM3O75607 178 aaKnown RBP15.63■□□□□ 0.09
GYPA-210ENST00000514603 DMRT2Q9Y5R5 561 aa15.57■□□□□ 0.08
GYPA-210ENST00000514603 RNF216Q9NWF9 866 aaPredicted RBP15.39■□□□□ 0.05
GYPA-210ENST00000514603 HOXD11P31277 338 aaPredicted RBP15.29■□□□□ 0.04
GYPA-210ENST00000514603 SLC4A1APQ9BWU0 796 aaKnown RBP15.28■□□□□ 0.04
GYPA-210ENST00000514603 DNAJC5BQ9UF47 199 aa15.09■□□□□ 0.01
GYPA-210ENST00000514603 EHMT2Q96KQ7 1210 aa15.05■□□□□ -0
GYPA-210ENST00000514603 DCAF8L1A6NGE4 600 aa14.93□□□□□ -0.02
GYPA-210ENST00000514603 RNF39Q9H2S5 420 aa14.79□□□□□ -0.04
GYPA-210ENST00000514603 ZBTB22O15209 634 aa14.78□□□□□ -0.04
GYPA-210ENST00000514603 CSRNP3Q8WYN3 585 aa14.78□□□□□ -0.04
GYPA-210ENST00000514603 SLC4A2P04920 1241 aa14.73□□□□□ -0.05
GYPA-210ENST00000514603 FOXD4L1Q9NU39 408 aa14.7□□□□□ -0.06
GYPA-210ENST00000514603 POTEHQ6S545 545 aa14.65□□□□□ -0.06
GYPA-210ENST00000514603 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.59□□□□□ -0.07
GYPA-210ENST00000514603 C1QBPQ07021 282 aaKnown RBP14.46□□□□□ -0.09
GYPA-210ENST00000514603 MYCNP04198 464 aaPredicted RBP14.42□□□□□ -0.1
GYPA-210ENST00000514603 U3KPZ7 1027 aaPredicted RBP14.39□□□□□ -0.11
GYPA-210ENST00000514603 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.2□□□□□ -0.14
GYPA-210ENST00000514603 HNRNPUL2Q1KMD3 747 aaKnown RBP14.2□□□□□ -0.14
GYPA-210ENST00000514603 SAMD1Q6SPF0 538 aaPredicted RBP14.17□□□□□ -0.14
GYPA-210ENST00000514603 ATXN8OSP0DMR3 200 aa14.13□□□□□ -0.15
GYPA-210ENST00000514603 ATF5Q9Y2D1 282 aaPredicted RBP14.06□□□□□ -0.16
GYPA-210ENST00000514603 APLP2Q06481 763 aa14.01□□□□□ -0.17
GYPA-210ENST00000514603 SPINK5Q9NQ38 1064 aaPredicted RBP13.95□□□□□ -0.18
GYPA-210ENST00000514603 CAPN15O75808 1086 aa13.88□□□□□ -0.19
GYPA-210ENST00000514603 TRHP20396 242 aaPredicted RBP13.85□□□□□ -0.19
GYPA-210ENST00000514603 ZNF219Q9P2Y4 722 aaPredicted RBP13.82□□□□□ -0.2
GYPA-210ENST00000514603 ABCB7O75027 752 aa13.66□□□□□ -0.22
GYPA-210ENST00000514603 POLA2Q14181 598 aa13.65□□□□□ -0.22
GYPA-210ENST00000514603 DSG3P32926 999 aa13.6□□□□□ -0.23
GYPA-210ENST00000514603 MKRN4PQ13434 485 aaPredicted RBP13.45□□□□□ -0.26
GYPA-210ENST00000514603 FBLN2P98095 1184 aa13.42□□□□□ -0.26
GYPA-210ENST00000514603 ZBTB12Q9Y330 459 aaPredicted RBP13.4□□□□□ -0.26
GYPA-210ENST00000514603 FKBP8Q14318 412 aa13.36□□□□□ -0.27
GYPA-210ENST00000514603 OSCARQ8IYS5 282 aa13.21□□□□□ -0.29
GYPA-210ENST00000514603 SPDYE4A6NLX3 237 aa13.2□□□□□ -0.3
GYPA-210ENST00000514603 SP7Q8TDD2 431 aaPredicted RBP13.19□□□□□ -0.3
GYPA-210ENST00000514603 SPDYE2BA6NHP3 402 aa13.06□□□□□ -0.32
GYPA-210ENST00000514603 SPDYE6P0CI01 402 aa13.06□□□□□ -0.32
GYPA-210ENST00000514603 SPDYE2Q495Y8 402 aa13.06□□□□□ -0.32
GYPA-210ENST00000514603 CHRDL2Q6WN34 429 aa13.06□□□□□ -0.32
GYPA-210ENST00000514603 ZNF692Q9BU19 519 aaPredicted RBP13.04□□□□□ -0.32
GYPA-210ENST00000514603 PROM2Q8N271 834 aa12.99□□□□□ -0.33
GYPA-210ENST00000514603 SSUH2Q9Y2M2 353 aa12.98□□□□□ -0.33
GYPA-210ENST00000514603 RBM42Q9BTD8 480 aaKnown RBP12.93□□□□□ -0.34
GYPA-210ENST00000514603 PABPN1Q86U42 306 aaKnown RBP eCLIP12.89□□□□□ -0.35
GYPA-210ENST00000514603 AKT1S1Q96B36 256 aa12.81□□□□□ -0.36
GYPA-210ENST00000514603 FBXO3Q9UK99 471 aa12.8□□□□□ -0.36
GYPA-210ENST00000514603 REM2Q8IYK8 340 aaPredicted RBP12.71□□□□□ -0.37
GYPA-210ENST00000514603 VASPP50552 380 aaPredicted RBP12.66□□□□□ -0.38
GYPA-210ENST00000514603 STAG3Q9UJ98 1225 aa12.66□□□□□ -0.38
GYPA-210ENST00000514603 SPDYE1Q8NFV5 336 aaPredicted RBP12.65□□□□□ -0.38
GYPA-210ENST00000514603 CLEC11AQ9Y240 323 aa12.61□□□□□ -0.39
GYPA-210ENST00000514603 HAX1O00165 279 aa12.58□□□□□ -0.4
GYPA-210ENST00000514603 PITPNM1O00562 1244 aa12.58□□□□□ -0.4
GYPA-210ENST00000514603 PLSCR2Q9NRY7 297 aa12.58□□□□□ -0.4
GYPA-210ENST00000514603 PIP4P2Q8N4L2 257 aa12.52□□□□□ -0.41
GYPA-210ENST00000514603 PLCD3Q8N3E9 789 aa12.51□□□□□ -0.41
GYPA-210ENST00000514603 PRR29P0C7W0 189 aa12.5□□□□□ -0.41
GYPA-210ENST00000514603 IFNLR1Q8IU57 520 aaPredicted RBP12.5□□□□□ -0.41
GYPA-210ENST00000514603 MIER1Q8N108 512 aa12.5□□□□□ -0.41
GYPA-210ENST00000514603 KLHL34Q8N239 644 aa12.41□□□□□ -0.42
GYPA-210ENST00000514603 PLEKHG5O94827 1062 aa12.4□□□□□ -0.42
GYPA-210ENST00000514603 RTN4Q9NQC3 1192 aaKnown RBP12.4□□□□□ -0.42
GYPA-210ENST00000514603 EVX2Q03828 476 aa12.39□□□□□ -0.43
GYPA-210ENST00000514603 AMER1Q5JTC6 1135 aaPredicted RBP12.38□□□□□ -0.43
GYPA-210ENST00000514603 CREBZFQ9NS37 354 aa12.38□□□□□ -0.43
GYPA-210ENST00000514603 LHX8Q68G74 356 aa12.35□□□□□ -0.43
GYPA-210ENST00000514603 ZBTB47Q9UFB7 747 aaPredicted RBP12.32□□□□□ -0.44
GYPA-210ENST00000514603 SPOCK2Q92563 424 aa12.31□□□□□ -0.44
GYPA-210ENST00000514603 CHADLQ6NUI6 762 aa12.3□□□□□ -0.44
GYPA-210ENST00000514603 FXR2P51116 673 aaKnown RBP eCLIP12.29□□□□□ -0.44
GYPA-210ENST00000514603 MNX1P50219 401 aaPredicted RBP12.27□□□□□ -0.45
GYPA-210ENST00000514603 PRKAR2AP13861 404 aaKnown RBP12.25□□□□□ -0.45
GYPA-210ENST00000514603 FARP1Q9Y4F1 1045 aaPredicted RBP12.18□□□□□ -0.46
GYPA-210ENST00000514603 NUBP1P53384 320 aa12.17□□□□□ -0.46
GYPA-210ENST00000514603 NPM1P06748 294 aaKnown RBP eCLIP12.15□□□□□ -0.46
GYPA-210ENST00000514603 PKD2Q13563 968 aa12.14□□□□□ -0.47
GYPA-210ENST00000514603 CIZ1Q9ULV3 898 aaPredicted RBP12.12□□□□□ -0.47
GYPA-210ENST00000514603 RASEFQ8IZ41 740 aa12.1□□□□□ -0.47
GYPA-210ENST00000514603 FAM212AQ96EL1 285 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms