Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 AC116562.4-202ENST00000641738 218 ntBASIC18.62■□□□□ 0.57
PRAMEP78395 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEP78395 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.62■□□□□ 0.57
PRAMEP78395 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEP78395 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEP78395 AC034236.2-201ENST00000606662 1610 ntBASIC18.62■□□□□ 0.57
PRAMEP78395 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEP78395 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.62■□□□□ 0.57
PRAMEP78395 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.62■□□□□ 0.57
PRAMEP78395 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.62■□□□□ 0.57
PRAMEP78395 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEP78395 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEP78395 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEP78395 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEP78395 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEP78395 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEP78395 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.62■□□□□ 0.57
PRAMEP78395 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEP78395 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.61■□□□□ 0.57
PRAMEP78395 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEP78395 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.61■□□□□ 0.57
PRAMEP78395 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEP78395 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEP78395 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.61■□□□□ 0.57
PRAMEP78395 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEP78395 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
PRAMEP78395 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEP78395 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.61■□□□□ 0.57
PRAMEP78395 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEP78395 AC093827.2-201ENST00000512654 315 ntBASIC18.61■□□□□ 0.57
PRAMEP78395 AP003041.3-201ENST00000527151 707 ntBASIC18.61■□□□□ 0.57
PRAMEP78395 MIR4674-201ENST00000582457 87 ntBASIC18.61■□□□□ 0.57
PRAMEP78395 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.61■□□□□ 0.57
PRAMEP78395 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.61■□□□□ 0.57
PRAMEP78395 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEP78395 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEP78395 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
PRAMEP78395 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEP78395 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEP78395 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.61■□□□□ 0.57
PRAMEP78395 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PRAMEP78395 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PRAMEP78395 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PRAMEP78395 AC018470.1-201ENST00000624790 3129 ntBASIC18.6■□□□□ 0.57
PRAMEP78395 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEP78395 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEP78395 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEP78395 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.6■□□□□ 0.57
PRAMEP78395 MYLKP1-201ENST00000509077 1580 ntBASIC18.6■□□□□ 0.57
PRAMEP78395 AC036111.1-201ENST00000533973 1582 ntBASIC18.6■□□□□ 0.57
PRAMEP78395 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.6■□□□□ 0.57
PRAMEP78395 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEP78395 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEP78395 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PRAMEP78395 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.6■□□□□ 0.57
PRAMEP78395 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.6■□□□□ 0.57
PRAMEP78395 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PRAMEP78395 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.6■□□□□ 0.57
PRAMEP78395 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEP78395 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEP78395 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEP78395 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.6■□□□□ 0.57
PRAMEP78395 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEP78395 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.6■□□□□ 0.57
PRAMEP78395 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEP78395 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEP78395 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.6■□□□□ 0.57
PRAMEP78395 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PRAMEP78395 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEP78395 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEP78395 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
PRAMEP78395 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEP78395 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.59■□□□□ 0.57
PRAMEP78395 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.59■□□□□ 0.57
PRAMEP78395 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PRAMEP78395 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEP78395 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEP78395 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEP78395 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.59■□□□□ 0.57
PRAMEP78395 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PRAMEP78395 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.59■□□□□ 0.57
PRAMEP78395 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PRAMEP78395 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEP78395 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.59■□□□□ 0.57
PRAMEP78395 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.59■□□□□ 0.57
PRAMEP78395 KRT18P41-201ENST00000518924 1277 ntBASIC18.59■□□□□ 0.57
PRAMEP78395 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.59■□□□□ 0.57
PRAMEP78395 BX088651.1-201ENST00000540551 451 ntBASIC18.59■□□□□ 0.57
PRAMEP78395 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEP78395 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.59■□□□□ 0.57
PRAMEP78395 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEP78395 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.59■□□□□ 0.57
PRAMEP78395 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.59■□□□□ 0.57
PRAMEP78395 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEP78395 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PRAMEP78395 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PRAMEP78395 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PRAMEP78395 AC135050.7-201ENST00000624508 2218 ntBASIC18.58■□□□□ 0.57
PRAMEP78395 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PRAMEP78395 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms