Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.29■□□□□ 0.84
ACLYP53396 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACLYP53396 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACLYP53396 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.28■□□□□ 0.84
ACLYP53396 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ACLYP53396 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
ACLYP53396 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACLYP53396 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ACLYP53396 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ACLYP53396 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACLYP53396 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACLYP53396 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ACLYP53396 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ACLYP53396 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACLYP53396 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
ACLYP53396 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.28■□□□□ 0.84
ACLYP53396 AC009533.2-201ENST00000543664 586 ntBASIC20.28■□□□□ 0.84
ACLYP53396 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.28■□□□□ 0.84
ACLYP53396 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACLYP53396 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ACLYP53396 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
ACLYP53396 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ACLYP53396 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACLYP53396 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACLYP53396 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACLYP53396 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ACLYP53396 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.27■□□□□ 0.84
ACLYP53396 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ACLYP53396 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACLYP53396 INTS4P1-201ENST00000438455 1935 ntBASIC20.27■□□□□ 0.84
ACLYP53396 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.27■□□□□ 0.84
ACLYP53396 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACLYP53396 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ACLYP53396 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ACLYP53396 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.27■□□□□ 0.84
ACLYP53396 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.27■□□□□ 0.84
ACLYP53396 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ACLYP53396 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ACLYP53396 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACLYP53396 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ACLYP53396 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.27■□□□□ 0.84
ACLYP53396 AC005104.2-201ENST00000427818 678 ntBASIC20.27■□□□□ 0.84
ACLYP53396 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.27■□□□□ 0.84
ACLYP53396 PGAM5P1-201ENST00000518923 814 ntBASIC20.27■□□□□ 0.84
ACLYP53396 IGHV3-22-201ENST00000520721 359 ntBASIC20.27■□□□□ 0.84
ACLYP53396 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.27■□□□□ 0.84
ACLYP53396 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.27■□□□□ 0.84
ACLYP53396 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.27■□□□□ 0.84
ACLYP53396 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACLYP53396 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ACLYP53396 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACLYP53396 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ACLYP53396 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.27■□□□□ 0.83
ACLYP53396 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.27■□□□□ 0.83
ACLYP53396 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.26■□□□□ 0.83
ACLYP53396 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.26■□□□□ 0.83
ACLYP53396 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACLYP53396 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.26■□□□□ 0.83
ACLYP53396 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.26■□□□□ 0.83
ACLYP53396 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.26■□□□□ 0.83
ACLYP53396 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACLYP53396 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.26■□□□□ 0.83
ACLYP53396 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.26■□□□□ 0.83
ACLYP53396 AC145285.3-201ENST00000564603 959 ntBASIC20.26■□□□□ 0.83
ACLYP53396 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ACLYP53396 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.26■□□□□ 0.83
ACLYP53396 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.26■□□□□ 0.83
ACLYP53396 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.26■□□□□ 0.83
ACLYP53396 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.26■□□□□ 0.83
ACLYP53396 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACLYP53396 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.26■□□□□ 0.83
ACLYP53396 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACLYP53396 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.26■□□□□ 0.83
ACLYP53396 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
ACLYP53396 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.26■□□□□ 0.83
ACLYP53396 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
ACLYP53396 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACLYP53396 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACLYP53396 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ACLYP53396 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.26■□□□□ 0.83
ACLYP53396 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACLYP53396 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACLYP53396 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACLYP53396 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACLYP53396 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.25■□□□□ 0.83
ACLYP53396 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACLYP53396 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
ACLYP53396 AC009102.3-201ENST00000623118 1491 ntBASIC20.25■□□□□ 0.83
ACLYP53396 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
ACLYP53396 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.25■□□□□ 0.83
ACLYP53396 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.25■□□□□ 0.83
ACLYP53396 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACLYP53396 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
ACLYP53396 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ACLYP53396 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACLYP53396 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACLYP53396 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACLYP53396 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.25■□□□□ 0.83
ACLYP53396 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.25■□□□□ 0.83
ACLYP53396 AC021087.4-201ENST00000563761 564 ntBASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms