Protein–RNA interactions for Protein: P52799

EFNB2, Ephrin-B2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2P52799 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.96■□□□□ 0.15
EFNB2P52799 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EFNB2P52799 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
EFNB2P52799 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EFNB2P52799 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
EFNB2P52799 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
EFNB2P52799 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.96■□□□□ 0.14
EFNB2P52799 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.96■□□□□ 0.14
EFNB2P52799 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.96■□□□□ 0.14
EFNB2P52799 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
EFNB2P52799 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EFNB2P52799 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EFNB2P52799 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
EFNB2P52799 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.95■□□□□ 0.14
EFNB2P52799 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
EFNB2P52799 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EFNB2P52799 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.95■□□□□ 0.14
EFNB2P52799 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.95■□□□□ 0.14
EFNB2P52799 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
EFNB2P52799 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
EFNB2P52799 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EFNB2P52799 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EFNB2P52799 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EFNB2P52799 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
EFNB2P52799 PRORSD1P-202ENST00000563365 2154 ntBASIC15.95■□□□□ 0.14
EFNB2P52799 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
EFNB2P52799 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
EFNB2P52799 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EFNB2P52799 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
EFNB2P52799 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
EFNB2P52799 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
EFNB2P52799 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
EFNB2P52799 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.95■□□□□ 0.14
EFNB2P52799 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
EFNB2P52799 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.95■□□□□ 0.14
EFNB2P52799 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.95■□□□□ 0.14
EFNB2P52799 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.95■□□□□ 0.14
EFNB2P52799 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
EFNB2P52799 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.95■□□□□ 0.14
EFNB2P52799 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.95■□□□□ 0.14
EFNB2P52799 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.95■□□□□ 0.14
EFNB2P52799 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC15.95■□□□□ 0.14
EFNB2P52799 MTDHP1-201ENST00000605323 784 ntBASIC15.95■□□□□ 0.14
EFNB2P52799 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
EFNB2P52799 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EFNB2P52799 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
EFNB2P52799 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EFNB2P52799 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.95■□□□□ 0.14
EFNB2P52799 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
EFNB2P52799 PCDHA12-202ENST00000613593 2588 ntBASIC15.95■□□□□ 0.14
EFNB2P52799 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
EFNB2P52799 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.95■□□□□ 0.14
EFNB2P52799 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
EFNB2P52799 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
EFNB2P52799 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
EFNB2P52799 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
EFNB2P52799 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.95■□□□□ 0.14
EFNB2P52799 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
EFNB2P52799 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.94■□□□□ 0.14
EFNB2P52799 KRT8P11-201ENST00000409686 1436 ntBASIC15.94■□□□□ 0.14
EFNB2P52799 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
EFNB2P52799 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
EFNB2P52799 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
EFNB2P52799 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EFNB2P52799 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EFNB2P52799 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
EFNB2P52799 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EFNB2P52799 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
EFNB2P52799 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.94■□□□□ 0.14
EFNB2P52799 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
EFNB2P52799 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.94■□□□□ 0.14
EFNB2P52799 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
EFNB2P52799 Z85996.1-201ENST00000494644 937 ntBASIC15.94■□□□□ 0.14
EFNB2P52799 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.94■□□□□ 0.14
EFNB2P52799 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
EFNB2P52799 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EFNB2P52799 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.94■□□□□ 0.14
EFNB2P52799 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
EFNB2P52799 NBPF21P-201ENST00000425093 1451 ntBASIC15.94■□□□□ 0.14
EFNB2P52799 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
EFNB2P52799 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EFNB2P52799 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.94■□□□□ 0.14
EFNB2P52799 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
EFNB2P52799 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
EFNB2P52799 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EFNB2P52799 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.94■□□□□ 0.14
EFNB2P52799 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.94■□□□□ 0.14
EFNB2P52799 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.94■□□□□ 0.14
EFNB2P52799 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EFNB2P52799 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
EFNB2P52799 HCG11-201ENST00000411553 5696 ntBASIC15.94■□□□□ 0.14
EFNB2P52799 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
EFNB2P52799 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.94■□□□□ 0.14
EFNB2P52799 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EFNB2P52799 AC080080.1-201ENST00000625121 2420 ntBASIC15.94■□□□□ 0.14
EFNB2P52799 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.94■□□□□ 0.14
EFNB2P52799 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.94■□□□□ 0.14
EFNB2P52799 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
EFNB2P52799 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
EFNB2P52799 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms