Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.81■□□□□ 0.6
PTPN3P26045 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.81■□□□□ 0.6
PTPN3P26045 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.81■□□□□ 0.6
PTPN3P26045 AC104390.1-201ENST00000555663 520 ntBASIC18.81■□□□□ 0.6
PTPN3P26045 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.81■□□□□ 0.6
PTPN3P26045 AC145285.6-201ENST00000604632 637 ntBASIC18.81■□□□□ 0.6
PTPN3P26045 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.81■□□□□ 0.6
PTPN3P26045 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN3P26045 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.81■□□□□ 0.6
PTPN3P26045 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PTPN3P26045 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN3P26045 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.81■□□□□ 0.6
PTPN3P26045 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PTPN3P26045 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN3P26045 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN3P26045 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.81■□□□□ 0.6
PTPN3P26045 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN3P26045 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.81■□□□□ 0.6
PTPN3P26045 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PTPN3P26045 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN3P26045 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN3P26045 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN3P26045 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.8■□□□□ 0.6
PTPN3P26045 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.8■□□□□ 0.6
PTPN3P26045 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN3P26045 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN3P26045 KRT18P22-201ENST00000402024 1347 ntBASIC18.8■□□□□ 0.6
PTPN3P26045 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PTPN3P26045 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.8■□□□□ 0.6
PTPN3P26045 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.8■□□□□ 0.6
PTPN3P26045 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PTPN3P26045 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN3P26045 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
PTPN3P26045 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.8■□□□□ 0.6
PTPN3P26045 MIR149-201ENST00000384879 89 ntBASIC18.8■□□□□ 0.6
PTPN3P26045 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN3P26045 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
PTPN3P26045 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.8■□□□□ 0.6
PTPN3P26045 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.8■□□□□ 0.6
PTPN3P26045 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.8■□□□□ 0.6
PTPN3P26045 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN3P26045 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.8■□□□□ 0.6
PTPN3P26045 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.8■□□□□ 0.6
PTPN3P26045 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.8■□□□□ 0.6
PTPN3P26045 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN3P26045 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
PTPN3P26045 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.8■□□□□ 0.6
PTPN3P26045 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN3P26045 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.8■□□□□ 0.6
PTPN3P26045 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN3P26045 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN3P26045 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.8■□□□□ 0.6
PTPN3P26045 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PTPN3P26045 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.8■□□□□ 0.6
PTPN3P26045 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.8■□□□□ 0.6
PTPN3P26045 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN3P26045 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN3P26045 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN3P26045 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN3P26045 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN3P26045 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN3P26045 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN3P26045 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN3P26045 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PTPN3P26045 AC009102.3-201ENST00000623118 1491 ntBASIC18.79■□□□□ 0.6
PTPN3P26045 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN3P26045 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN3P26045 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.79■□□□□ 0.6
PTPN3P26045 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN3P26045 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN3P26045 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PTPN3P26045 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN3P26045 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN3P26045 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PTPN3P26045 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.79■□□□□ 0.6
PTPN3P26045 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PTPN3P26045 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PTPN3P26045 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN3P26045 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN3P26045 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN3P26045 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN3P26045 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PTPN3P26045 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN3P26045 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN3P26045 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PTPN3P26045 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN3P26045 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.78■□□□□ 0.6
PTPN3P26045 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN3P26045 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN3P26045 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN3P26045 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PTPN3P26045 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN3P26045 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN3P26045 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN3P26045 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
PTPN3P26045 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.78■□□□□ 0.6
PTPN3P26045 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.78■□□□□ 0.6
PTPN3P26045 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
PTPN3P26045 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.78■□□□□ 0.6
PTPN3P26045 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms