Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.58■□□□□ 0.08
COL8A2P25067 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL8A2P25067 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL8A2P25067 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL8A2P25067 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL8A2P25067 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL8A2P25067 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL8A2P25067 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL8A2P25067 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.58■□□□□ 0.08
COL8A2P25067 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL8A2P25067 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.57■□□□□ 0.08
COL8A2P25067 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL8A2P25067 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL8A2P25067 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL8A2P25067 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.57■□□□□ 0.08
COL8A2P25067 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.57■□□□□ 0.08
COL8A2P25067 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL8A2P25067 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.57■□□□□ 0.08
COL8A2P25067 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.57■□□□□ 0.08
COL8A2P25067 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.57■□□□□ 0.08
COL8A2P25067 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL8A2P25067 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.57■□□□□ 0.08
COL8A2P25067 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
COL8A2P25067 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
COL8A2P25067 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.57■□□□□ 0.08
COL8A2P25067 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
COL8A2P25067 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.57■□□□□ 0.08
COL8A2P25067 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.57■□□□□ 0.08
COL8A2P25067 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
COL8A2P25067 AC083906.6-201ENST00000641366 219 ntBASIC15.57■□□□□ 0.08
COL8A2P25067 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL8A2P25067 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL8A2P25067 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL8A2P25067 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL8A2P25067 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL8A2P25067 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL8A2P25067 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL8A2P25067 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
COL8A2P25067 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.57■□□□□ 0.08
COL8A2P25067 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.57■□□□□ 0.08
COL8A2P25067 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.57■□□□□ 0.08
COL8A2P25067 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.57■□□□□ 0.08
COL8A2P25067 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
COL8A2P25067 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL8A2P25067 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COL8A2P25067 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL8A2P25067 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.56■□□□□ 0.08
COL8A2P25067 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
COL8A2P25067 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.56■□□□□ 0.08
COL8A2P25067 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL8A2P25067 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
COL8A2P25067 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL8A2P25067 PVRIG2P-201ENST00000435460 978 ntBASIC15.56■□□□□ 0.08
COL8A2P25067 HCG4P8-203ENST00000443049 980 ntBASIC15.56■□□□□ 0.08
COL8A2P25067 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COL8A2P25067 MIR3180-4-201ENST00000582223 153 ntBASIC15.56■□□□□ 0.08
COL8A2P25067 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
COL8A2P25067 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COL8A2P25067 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.56■□□□□ 0.08
COL8A2P25067 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.56■□□□□ 0.08
COL8A2P25067 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
COL8A2P25067 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.56■□□□□ 0.08
COL8A2P25067 KRT8P50-201ENST00000562022 1438 ntBASIC15.56■□□□□ 0.08
COL8A2P25067 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.56■□□□□ 0.08
COL8A2P25067 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COL8A2P25067 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.56■□□□□ 0.08
COL8A2P25067 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL8A2P25067 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
COL8A2P25067 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL8A2P25067 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COL8A2P25067 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL8A2P25067 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL8A2P25067 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COL8A2P25067 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL8A2P25067 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL8A2P25067 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.55■□□□□ 0.08
COL8A2P25067 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.55■□□□□ 0.08
COL8A2P25067 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC15.55■□□□□ 0.08
COL8A2P25067 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL8A2P25067 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COL8A2P25067 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL8A2P25067 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
COL8A2P25067 AC016734.2-201ENST00000624325 1377 ntBASIC15.55■□□□□ 0.08
COL8A2P25067 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL8A2P25067 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL8A2P25067 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COL8A2P25067 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.55■□□□□ 0.08
COL8A2P25067 BX276092.5-203ENST00000456199 560 ntBASIC15.55■□□□□ 0.08
COL8A2P25067 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COL8A2P25067 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.55■□□□□ 0.08
COL8A2P25067 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.55■□□□□ 0.08
COL8A2P25067 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.55■□□□□ 0.08
COL8A2P25067 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.55■□□□□ 0.08
COL8A2P25067 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
COL8A2P25067 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL8A2P25067 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.55■□□□□ 0.08
COL8A2P25067 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.55■□□□□ 0.08
COL8A2P25067 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL8A2P25067 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.55■□□□□ 0.08
COL8A2P25067 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms