Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 AC097493.4-201ENST00000641197 219 ntBASIC19.41■□□□□ 0.7
MMP8P22894 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MMP8P22894 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.41■□□□□ 0.7
MMP8P22894 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.41■□□□□ 0.7
MMP8P22894 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MMP8P22894 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.41■□□□□ 0.7
MMP8P22894 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MMP8P22894 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.41■□□□□ 0.7
MMP8P22894 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.41■□□□□ 0.7
MMP8P22894 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MMP8P22894 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MMP8P22894 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MMP8P22894 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MMP8P22894 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
MMP8P22894 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MMP8P22894 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MMP8P22894 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.4■□□□□ 0.7
MMP8P22894 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
MMP8P22894 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MMP8P22894 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MMP8P22894 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.4■□□□□ 0.7
MMP8P22894 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MMP8P22894 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.4■□□□□ 0.7
MMP8P22894 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.4■□□□□ 0.7
MMP8P22894 SLC25A3P1-201ENST00000443844 931 ntBASIC19.4■□□□□ 0.7
MMP8P22894 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.4■□□□□ 0.7
MMP8P22894 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MMP8P22894 AC009065.1-201ENST00000564055 1225 ntBASIC19.4■□□□□ 0.7
MMP8P22894 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.4■□□□□ 0.7
MMP8P22894 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.4■□□□□ 0.7
MMP8P22894 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MMP8P22894 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
MMP8P22894 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MMP8P22894 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
MMP8P22894 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MMP8P22894 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MMP8P22894 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MMP8P22894 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MMP8P22894 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
MMP8P22894 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
MMP8P22894 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
MMP8P22894 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
MMP8P22894 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
MMP8P22894 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MMP8P22894 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
MMP8P22894 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.39■□□□□ 0.69
MMP8P22894 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
MMP8P22894 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
MMP8P22894 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
MMP8P22894 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.39■□□□□ 0.69
MMP8P22894 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MMP8P22894 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
MMP8P22894 AC141257.4-201ENST00000634557 245 ntBASIC19.39■□□□□ 0.69
MMP8P22894 AC136944.6-201ENST00000634818 245 ntBASIC19.39■□□□□ 0.69
MMP8P22894 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MMP8P22894 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MMP8P22894 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.39■□□□□ 0.69
MMP8P22894 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
MMP8P22894 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MMP8P22894 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MMP8P22894 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.39■□□□□ 0.69
MMP8P22894 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
MMP8P22894 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.39■□□□□ 0.69
MMP8P22894 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP8P22894 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP8P22894 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MMP8P22894 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
MMP8P22894 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP8P22894 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP8P22894 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.38■□□□□ 0.69
MMP8P22894 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MMP8P22894 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.38■□□□□ 0.69
MMP8P22894 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.38■□□□□ 0.69
MMP8P22894 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.38■□□□□ 0.69
MMP8P22894 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.38■□□□□ 0.69
MMP8P22894 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
MMP8P22894 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP8P22894 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
MMP8P22894 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
MMP8P22894 AC133561.5-201ENST00000635547 218 ntBASIC19.38■□□□□ 0.69
MMP8P22894 PHGDH-209ENST00000641074 1780 ntBASIC19.38■□□□□ 0.69
MMP8P22894 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP8P22894 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MMP8P22894 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP8P22894 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.38■□□□□ 0.69
MMP8P22894 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.38■□□□□ 0.69
MMP8P22894 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.38■□□□□ 0.69
MMP8P22894 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
MMP8P22894 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP8P22894 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP8P22894 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.37■□□□□ 0.69
MMP8P22894 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP8P22894 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP8P22894 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MMP8P22894 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MMP8P22894 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
MMP8P22894 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP8P22894 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MMP8P22894 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.37■□□□□ 0.69
MMP8P22894 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms